RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 CCDC39Q9UFE4 941 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 STBD1O95210 358 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 MYL3P08590 195 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 CST5P28325 142 aaPredicted RBP27.27■■□□□ 1.96
SCN1B-201ENST00000262631 PRKCEQ02156 737 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 FAM160A1Q05DH4 1040 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 KCNA10Q16322 511 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 RRAGBQ5VZM2 374 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 PLPPR4Q7Z2D5 763 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 C4orf19Q8IY42 314 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 SMARCAD1Q9H4L7 1026 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 BLOC1S4Q9NUP1 217 aa27.27■■□□□ 1.96
SCN1B-201ENST00000262631 E9PMD0 336 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 SLC26A4O43511 780 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 LYPLA2O95372 231 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 PURAQ00577 322 aaKnown RBP27.26■■□□□ 1.95
SCN1B-201ENST00000262631 LONRF3Q496Y0 759 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 KAT2BQ92831 832 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 NT5C3AQ9H0P0 336 aa27.26■■□□□ 1.95
SCN1B-201ENST00000262631 ZNF202O95125 648 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 F2P00734 622 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 MUTP22033 750 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 STAT6P42226 847 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 RNF180Q86T96 592 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 SH2D3AQ9BRG2 576 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 RNPEPQ9H4A4 650 aa27.25■■□□□ 1.95
SCN1B-201ENST00000262631 H3BRB1 525 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 YWHABP31946 246 aaKnown RBP27.24■■□□□ 1.95
SCN1B-201ENST00000262631 CXCL17Q6UXB2 119 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 ANO5Q75V66 913 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 CKAP2LQ8IYA6 745 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 TUT1Q9H6E5 874 aaKnown RBP27.24■■□□□ 1.95
SCN1B-201ENST00000262631 ERAP1Q9NZ08 941 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 ACTN4O43707 911 aaKnown RBP27.24■■□□□ 1.95
SCN1B-201ENST00000262631 ASGR1P07306 291 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 PLCB4Q15147 1175 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 PLA2G4FQ68DD2 849 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 IQUBQ8NA54 791 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 NACC1Q96RE7 527 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 DACT1Q9NYF0 836 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 SERTAD1Q9UHV2 236 aa27.24■■□□□ 1.95
SCN1B-201ENST00000262631 FRMPD3Q5JV73 1810 aa27.23■■□□□ 1.95
SCN1B-201ENST00000262631 OATP04181 439 aa27.23■■□□□ 1.95
SCN1B-201ENST00000262631 PPP1R13LQ8WUF5 828 aa27.23■■□□□ 1.95
SCN1B-201ENST00000262631 ZNF215Q9UL58 517 aaPredicted RBP27.23■■□□□ 1.95
SCN1B-201ENST00000262631 OGDHLQ9ULD0 1010 aa27.23■■□□□ 1.95
SCN1B-201ENST00000262631 DNM3Q9UQ16 869 aa27.23■■□□□ 1.95
SCN1B-201ENST00000262631 GJB1P08034 283 aa27.22■■□□□ 1.95
SCN1B-201ENST00000262631 SLC26A2P50443 739 aa27.22■■□□□ 1.95
SCN1B-201ENST00000262631 XKR3Q5GH77 459 aa27.22■■□□□ 1.95
SCN1B-201ENST00000262631 U2AF1L4Q8WU68 220 aaKnown RBP27.22■■□□□ 1.95
SCN1B-201ENST00000262631 WDR81Q562E7 1941 aa27.22■■□□□ 1.95
SCN1B-201ENST00000262631 ZEB2O60315 1214 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 DKC1O60832 514 aaKnown RBP eCLIP27.21■■□□□ 1.95
SCN1B-201ENST00000262631 NPEPPSP55786 919 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 ATP8B4Q8TF62 1192 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 RAD54LQ92698 747 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 CRISPLD2Q9H0B8 497 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 BHMT2Q9H2M3 363 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 STK17AQ9UEE5 414 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 SEPT9Q9UHD8 586 aaPredicted RBP27.21■■□□□ 1.95
SCN1B-201ENST00000262631 KPNA6O60684 536 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 CHMP4BP1P59074 171 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 MCM6Q14566 821 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 PCSK9Q8NBP7 692 aaKnown RBP27.21■■□□□ 1.95
SCN1B-201ENST00000262631 ARRDC4Q8NCT1 418 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 LARP4BQ92615 738 aaKnown RBP27.21■■□□□ 1.95
SCN1B-201ENST00000262631 MTRQ99707 1265 aa27.21■■□□□ 1.95
SCN1B-201ENST00000262631 HAS3O00219 553 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 SGPL1O95470 568 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 EYA4O95677 639 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 SLFN14P0C7P3 912 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 PLA2G4BP0C869 781 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 ACLYP53396 1101 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 DHX8Q14562 1220 aaKnown RBP27.2■■□□□ 1.94
SCN1B-201ENST00000262631 KIAA0753Q2KHM9 967 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 STAMQ92783 540 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 MTG1Q9BT17 334 aaPredicted RBP27.2■■□□□ 1.94
SCN1B-201ENST00000262631 TRPC6Q9Y210 931 aa27.2■■□□□ 1.94
SCN1B-201ENST00000262631 RARRES1P49788 294 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 PSEN2P49810 448 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 MFSD10Q14728 455 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 KRBA2Q6ZNG9 492 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 GRAMD1CQ8IYS0 662 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 BBXQ8WY36 941 aaPredicted RBP27.19■■□□□ 1.94
SCN1B-201ENST00000262631 PYM1Q9BRP8 204 aaKnown RBP27.19■■□□□ 1.94
SCN1B-201ENST00000262631 ANKEF1Q9NU02 776 aa27.19■■□□□ 1.94
SCN1B-201ENST00000262631 ZBTB42B2RXF5 422 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 MBD3O95983 291 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 SLC12A3P55017 1021 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 KCTD17Q8N5Z5 321 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 CNNM3Q8NE01 707 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 FAM167AQ96KS9 214 aa27.18■■□□□ 1.94
SCN1B-201ENST00000262631 NIFKQ9BYG3 293 aaKnown RBP27.18■■□□□ 1.94
SCN1B-201ENST00000262631 DBR1Q9UK59 544 aaKnown RBP27.18■■□□□ 1.94
SCN1B-201ENST00000262631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.17■■□□□ 1.94
SCN1B-201ENST00000262631 SSBP05455 408 aaKnown RBP eCLIP27.17■■□□□ 1.94
SCN1B-201ENST00000262631 XRCC6P12956 609 aaKnown RBP eCLIP27.17■■□□□ 1.94
SCN1B-201ENST00000262631 XKR9Q5GH70 373 aa27.17■■□□□ 1.94
SCN1B-201ENST00000262631 CEP57L1Q8IYX8 460 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms