RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 USP38Q8NB14 1042 aa17.25■□□□□ 0.35
SMURF2-201ENST00000262435 MEIS2O14770 477 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 ZNF572Q7Z3I7 529 aaPredicted RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 IQCKQ8N0W5 287 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 GDF3Q9NR23 364 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 DNM3Q9UQ16 869 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 NR2E1Q9Y466 385 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 PCNTO95613 3336 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 EML1O00423 815 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 ZNF76P36508 570 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 DAAM2Q86T65 1068 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 TBC1D22AQ8WUA7 517 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 KAT2BQ92831 832 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 FAM163AQ96GL9 167 aaPredicted RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 LUC7LQ9NQ29 371 aaKnown RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 PKD2L1Q9P0L9 805 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 GCNT4Q9P109 453 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 NAV1Q8NEY1 1877 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 SPATA31C1P0DKV0 1188 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 KNOP1Q1ED39 458 aaKnown RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 TPH2Q8IWU9 490 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 METTL13Q8N6R0 699 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 UBLCP1Q8WVY7 318 aaPredicted RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 CEP63Q96MT8 703 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
SMURF2-201ENST00000262435 PCDHGC5Q9Y5F6 944 aa17.24■□□□□ 0.35
SMURF2-201ENST00000262435 DAPK3O43293 454 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 LRRN2O75325 713 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
SMURF2-201ENST00000262435 TMOD1P28289 359 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 ALS2CLQ60I27 953 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 CAVIN3Q969G5 261 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 USP21Q9UK80 565 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 KRIT1O00522 736 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 SART1O43290 800 aaKnown RBP17.23■□□□□ 0.35
SMURF2-201ENST00000262435 KIF4AO95239 1232 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 TRIM49P0CI25 452 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 TRIM49CP0CI26 452 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 NOVP48745 357 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 ITIH3Q06033 890 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
SMURF2-201ENST00000262435 APOBEC3HQ6NTF7 200 aaKnown RBP17.23■□□□□ 0.35
SMURF2-201ENST00000262435 PEX26Q7Z412 305 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 TADA2BQ86TJ2 420 aa17.23■□□□□ 0.35
SMURF2-201ENST00000262435 ABCB11O95342 1321 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 NR3C1P04150 777 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 NR1D1P20393 614 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 IBSPP21815 317 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 CYP2J2P51589 502 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 AIPL1Q9NZN9 384 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 RREB1Q92766 1687 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 ODF2Q5BJF6 829 aa17.22■□□□□ 0.35
SMURF2-201ENST00000262435 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 COL5A3P25940 1745 aaPredicted RBP17.22■□□□□ 0.35
SMURF2-201ENST00000262435 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 TTI1O43156 1089 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 LSP1P33241 339 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 JAG1P78504 1218 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ORC2Q13416 577 aaPredicted RBP17.21■□□□□ 0.35
SMURF2-201ENST00000262435 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 AADACL2Q6P093 401 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 MYCT1Q8N699 235 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 TRIM51Q9BSJ1 452 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
SMURF2-201ENST00000262435 SMIM23A6NLE4 172 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 E7EVH7 732 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 hCG_1984214I3L0E3 225 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ATP2C2O75185 946 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 BBOX1O75936 387 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ERLIN2O94905 339 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
SMURF2-201ENST00000262435 ZNF713Q8N859 430 aaPredicted RBP17.21■□□□□ 0.35
SMURF2-201ENST00000262435 UHMK1Q8TAS1 419 aaKnown RBP17.21■□□□□ 0.35
SMURF2-201ENST00000262435 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
SMURF2-201ENST00000262435 F5H6K3 240 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 MSH4O15457 936 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 GNA14O95837 355 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 HSD17B3P37058 310 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 TNNC1P63316 161 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 KLRC3Q07444 240 aa17.2■□□□□ 0.34
SMURF2-201ENST00000262435 SPIRE1Q08AE8 756 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms