RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 COASYQ13057 564 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 RESTQ13127 1097 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 RTN1Q16799 776 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 FRMD5Q7Z6J6 570 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 EFHBQ8N7U6 833 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 NKD2Q969F2 451 aaPredicted RBP15.16■□□□□ 0.02
SGCA-201ENST00000262018 RIPOR3Q96MK2 946 aa15.16■□□□□ 0.02
SGCA-201ENST00000262018 BARX2Q9UMQ3 279 aaPredicted RBP15.16■□□□□ 0.02
SGCA-201ENST00000262018 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
SGCA-201ENST00000262018 STK36Q9NRP7 1315 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 GVINP1Q7Z2Y8 2422 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 MED19A0JLT2 244 aaPredicted RBP15.15■□□□□ 0.02
SGCA-201ENST00000262018 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
SGCA-201ENST00000262018 DDAH1O94760 285 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 IFNAR1P17181 557 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 CAMK1Q14012 370 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 ADGRD2Q7Z7M1 963 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
SGCA-201ENST00000262018 KAT14Q9H8E8 782 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 PNMA2Q9UL42 364 aa15.15■□□□□ 0.02
SGCA-201ENST00000262018 ADGRA3Q8IWK6 1321 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 CALM1P0DP23 149 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 CALM2P0DP24 149 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 CALM3P0DP25 149 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
SGCA-201ENST00000262018 LAMC2Q13753 1193 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 RBM23Q86U06 439 aaKnown RBP15.14■□□□□ 0.01
SGCA-201ENST00000262018 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 PPTC7Q8NI37 304 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
SGCA-201ENST00000262018 ATP6V0A1Q93050 837 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 DDX41Q9UJV9 622 aaKnown RBP15.14■□□□□ 0.01
SGCA-201ENST00000262018 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
SGCA-201ENST00000262018 C17orf102A2RUQ5 167 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 NRIP1P48552 1158 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 TROAPQ12815 778 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 BTG3Q14201 252 aaPredicted RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 STXBP2Q15833 593 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 KLHL40Q2TBA0 621 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 EMID1Q96A84 441 aaPredicted RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 C8orf76Q96K31 380 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 TAAR1Q96RJ0 339 aa15.13■□□□□ 0.01
SGCA-201ENST00000262018 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
SGCA-201ENST00000262018 MYH6P13533 1939 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 SORBS3O60504 671 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 DNAJB1P25685 340 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
SGCA-201ENST00000262018 USH1GQ495M9 461 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 TMEM105Q8N8V8 129 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 FBXO18Q8NFZ0 1043 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 APBB2Q92870 758 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
SGCA-201ENST00000262018 TREHO43280 583 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 PPFIA3O75145 1194 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 GLP2RO95838 553 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 KRT85P78386 507 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 MCTP2Q6DN12 878 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 NSUN6Q8TEA1 469 aaKnown RBP15.11■□□□□ 0.01
SGCA-201ENST00000262018 WASF1Q92558 559 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 TBC1D5Q92609 795 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 PHKBQ93100 1093 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 DCHS1Q96JQ0 3298 aa15.11■□□□□ 0.01
SGCA-201ENST00000262018 PPFIA4O75335 1185 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 ITGB1P05556 798 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 PDHBP11177 359 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
SGCA-201ENST00000262018 FOSBP53539 338 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 TRIM22Q8IYM9 498 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 SPPL3Q8TCT6 385 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 SYTL5Q8TDW5 730 aaPredicted RBP15.1■□□□□ 0.01
SGCA-201ENST00000262018 RMDN3Q96TC7 470 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 SLC26A6Q9BXS9 759 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 RC3H2Q9HBD1 1191 aaKnown RBP15.1■□□□□ 0.01
SGCA-201ENST00000262018 EPG5Q9HCE0 2579 aa15.1■□□□□ 0.01
SGCA-201ENST00000262018 CAND2O75155 1236 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 DEXIO95424 95 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 MBD3O95983 291 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 HOXD8P13378 290 aaPredicted RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 SP100P23497 879 aaPredicted RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 FUT2Q10981 343 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 ATL3Q6DD88 541 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 GPT2Q8TD30 523 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 P2RX5Q93086 422 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 RMDN1Q96DB5 314 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 SPATA33Q96N06 139 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms