RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PPP1R12CQ9BZL4 782 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 TUBE1Q9UJT0 475 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 ARID2Q68CP9 1835 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 PARNO95453 639 aaKnown RBP21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 IGBP1P78318 339 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 PRKCEQ02156 737 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 PDIA5Q14554 519 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 XKR3Q5GH77 459 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 SERINC5Q86VE9 423 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 BANK1Q8NDB2 785 aa21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 NOC4LQ9BVI4 516 aaKnown RBP21.04■□□□□ 0.96
CYSTM1-201ENST00000261811 EML1O00423 815 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 TREHO43280 583 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 ANP32AP39687 249 aaKnown RBP21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 FXR2P51116 673 aaKnown RBP eCLIP21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 SPIRE1Q08AE8 756 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 RESTQ13127 1097 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 ARL6IP4Q66PJ3 421 aaKnown RBP21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 HAUS3Q68CZ6 603 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 MFSD5Q6N075 450 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 OTUD6AQ7L8S5 288 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 TRMT1LQ7Z2T5 733 aaKnown RBP21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 BADQ92934 168 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 ZSWIM4Q9H7M6 989 aa21.03■□□□□ 0.96
CYSTM1-201ENST00000261811 MAGEB2O15479 319 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 CAND2O75155 1236 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 ZSCAN22P10073 491 aaPredicted RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 ZNF200P98182 395 aaPredicted RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 ATP2C1P98194 919 aaPredicted RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 FPGSQ05932 587 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 PPIGQ13427 754 aaKnown RBP eCLIP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 EXOC8Q8IYI6 725 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 C4orf32Q8N8J7 132 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 EIF2AK1Q9BQI3 630 aaKnown RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 LRWD1Q9UFC0 647 aa21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 SEPT9Q9UHD8 586 aaPredicted RBP21.02■□□□□ 0.95
CYSTM1-201ENST00000261811 SCN5AQ14524 2016 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 DDX11L8A8MPP1 907 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 RFC2P35250 354 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 MAGEA10P43363 369 aaPredicted RBP21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 ADAM17P78536 824 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 MDM2Q00987 491 aaPredicted RBP21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 TPH2Q8IWU9 490 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 C4orf19Q8IY42 314 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 RPUSD2Q8IZ73 545 aaKnown RBP21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 LXNQ9BS40 222 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 TUFT1Q9NNX1 390 aa21.01■□□□□ 0.95
CYSTM1-201ENST00000261811 MBLAC1A4D2B0 266 aaPredicted RBP21■□□□□ 0.95
CYSTM1-201ENST00000261811 POTEMA6NI47 508 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 SELPP16109 830 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 ATP4AP20648 1035 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 KLRC1P26715 233 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 TMOD1P28289 359 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 CYP2C18P33260 490 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 THPOP40225 353 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 RBL2Q08999 1139 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 SF3A1Q15459 793 aaKnown RBP21■□□□□ 0.95
CYSTM1-201ENST00000261811 UGCGQ16739 394 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 MTHFD1LQ6UB35 978 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 DYDC2Q96IM9 177 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
CYSTM1-201ENST00000261811 JPH2Q9BR39 696 aaPredicted RBP21■□□□□ 0.95
CYSTM1-201ENST00000261811 NIFKQ9BYG3 293 aaKnown RBP21■□□□□ 0.95
CYSTM1-201ENST00000261811 PPME1Q9Y570 386 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 PCDHA2Q9Y5H9 948 aa21■□□□□ 0.95
CYSTM1-201ENST00000261811 M0QZ92 97 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 ZNF862O60290 1169 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 CKBP12277 381 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 MUTP22033 750 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 CYP4A11Q02928 519 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 KRT79Q5XKE5 535 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 LRRC8DQ7L1W4 858 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 NME8Q8N427 588 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 HSD17B14Q9BPX1 270 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 POLR3CQ9BUI4 534 aaPredicted RBP20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 UBE2OQ9C0C9 1292 aaKnown RBP20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 RGL1Q9NZL6 768 aa20.99■□□□□ 0.95
CYSTM1-201ENST00000261811 SMIM35A0A1B0GVV1 85 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 SLITRK3O94933 977 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 F13A1P00488 732 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 PFKMP08237 780 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 BMP8BP34820 402 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 CCL23P55773 120 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 TBC1D8BQ0IIM8 1120 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 CTTNQ14247 550 aaKnown RBP20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 HIC1Q14526 733 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 MARCH8Q5T0T0 291 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 RPAINQ86UA6 219 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 CTAGE1Q96RT6 745 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 GDF15Q99988 308 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 ATP6V1DQ9Y5K8 247 aa20.98■□□□□ 0.95
CYSTM1-201ENST00000261811 TCHHQ07283 1943 aa20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 LYPLA2O95372 231 aa20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 IQCF3P0C7M6 154 aa20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 XRCC6P12956 609 aaKnown RBP eCLIP20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 ITGB8P26012 769 aa20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 RPA1P27694 616 aa20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 YWHABP31946 246 aaKnown RBP20.97■□□□□ 0.95
CYSTM1-201ENST00000261811 DNM2P50570 870 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms