RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 MCF2LO15068 1137 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 KRT14P02533 472 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMOD1P28289 359 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 DYNLL1P63167 89 aaKnown RBP11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 DMP1Q13316 513 aaPredicted RBP11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 KCNB1Q14721 858 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 DGKHQ86XP1 1220 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 MORC4Q8TE76 937 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 CYFIP2Q96F07 1278 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 SEC16BQ96JE7 1060 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.55
CSNK1A1-201ENST00000261798 USP6P35125 1406 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 CPP00450 1065 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 AGTP01019 485 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 KRT3P12035 628 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 BASP1P80723 227 aaKnown RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 SPATA21Q7Z572 469 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 CRLF3Q8IUI8 442 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PIGSQ96S52 555 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 SAYSD1Q9NPB0 183 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TOM1L1O75674 476 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 APOEP02649 317 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 CCND1P24385 295 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 RANBP1P43487 201 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 DHX34Q14147 1143 aaKnown RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TRIM50Q86XT4 487 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TTC25Q96NG3 672 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 MRPL11Q9Y3B7 192 aaKnown RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 KRT37O76014 449 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 ACTN1P12814 892 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 KLC1Q07866 573 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 RFX6Q8HWS3 928 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 ACCSQ96QU6 501 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 HAUS8Q9BT25 410 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 AMACRQ9UHK6 382 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 LRRC14Q15048 493 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 AGBL2Q5U5Z8 902 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PARVGQ9HBI0 331 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMOD4Q9NZQ9 345 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PDZD4Q76G19 769 aaPredicted RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 DTNBP1Q96EV8 351 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 XPO6Q96QU8 1125 aaKnown RBP11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 PNKPQ96T60 521 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 NDE1Q9NXR1 346 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
CSNK1A1-201ENST00000261798 HSPA9P38646 679 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 MCAMP43121 646 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 SEC24CP53992 1094 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PTGISQ16647 500 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 JADE1Q6IE81 842 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PDXDC1Q6P996 788 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 ZIM3Q96PE6 472 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PCDHB4Q9Y5E5 795 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 SSU72P8A0A1W2PR75 194 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 HNRNPCL1O60812 293 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PIK3CAP42336 1068 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 AP2B1P63010 937 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 TMPRSS15P98073 1019 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 NEDD4P46934 1319 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 HNRNPDLO14979 420 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PDE6BP35913 854 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 BTDP43251 543 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 TCP10Q12799 353 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 TTC17Q96AE7 1141 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 USP15Q9Y4E8 981 aaPredicted RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 ARHGAP10A1A4S6 786 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 GSTA1P08263 222 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 GSTA2P09210 222 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 SRGNP10124 158 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 GPC5P78333 572 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 CRYMQ14894 314 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 ALX1Q15699 326 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 WDR11Q9BZH6 1224 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 THRAP3Q9Y2W1 955 aaKnown RBP11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 GYPCP04921 128 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 RNF207Q6ZRF8 634 aa11.63□□□□□ -0.55
CSNK1A1-201ENST00000261798 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms