RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SP4Q02446 784 aa24.75■■□□□ 1.55
SIX3-201ENST00000260653 EPM2AIP1Q7L775 607 aaPredicted RBP24.75■■□□□ 1.55
SIX3-201ENST00000260653 SH2D3AQ9BRG2 576 aa24.75■■□□□ 1.55
SIX3-201ENST00000260653 JPH1Q9HDC5 661 aaPredicted RBP24.75■■□□□ 1.55
SIX3-201ENST00000260653 PES1O00541 588 aaKnown RBP24.74■■□□□ 1.55
SIX3-201ENST00000260653 GAP43P17677 238 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 YWHABP31946 246 aaKnown RBP24.74■■□□□ 1.55
SIX3-201ENST00000260653 RARRES1P49788 294 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 ADKP55263 362 aaKnown RBP24.74■■□□□ 1.55
SIX3-201ENST00000260653 PSMC5P62195 406 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 UBXN1Q04323 297 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 FOXR2Q6PJQ5 311 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 PADI6Q6TGC4 694 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 SENP7Q9BQF6 1050 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 OLFML3Q9NRN5 406 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 SPTLC3Q9NUV7 552 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 PCDHA10Q9Y5I2 948 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 MYH11P35749 1972 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 KIF20AO95235 890 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 MTIF2P46199 727 aaKnown RBP24.74■■□□□ 1.55
SIX3-201ENST00000260653 ERVK-9P63128 1117 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 ERVK-24P63145 666 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 SP2Q02086 613 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 MYCT1Q8N699 235 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 TC2NQ8N9U0 490 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 PARVGQ9HBI0 331 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 DBR1Q9UK59 544 aaKnown RBP24.74■■□□□ 1.55
SIX3-201ENST00000260653 PNMA3Q9UL41 463 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 NFASCO94856 1347 aa24.74■■□□□ 1.55
SIX3-201ENST00000260653 CCL15-CCL14A0A0B4J2E2 113 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 CETPP11597 493 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 EDNRBP24530 442 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 CCL15Q16663 113 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 WDR78Q5VTH9 848 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 SEPT14Q6ZU15 432 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 C4orf19Q8IY42 314 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 C2orf69Q8N8R5 385 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 RDM1Q8NG50 284 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 ZNF526Q8TF50 670 aaPredicted RBP24.73■■□□□ 1.55
SIX3-201ENST00000260653 SLC9A2Q9UBY0 812 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 B4DLN1 442 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 BTBD19C9JJ37 291 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 PDHXO00330 501 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 PRPF6O94906 941 aaKnown RBP24.73■■□□□ 1.55
SIX3-201ENST00000260653 GUCY2CP25092 1073 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 HOXD13P35453 343 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 GTF2A2P52657 109 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 UTP14CQ5TAP6 766 aaKnown RBP24.73■■□□□ 1.55
SIX3-201ENST00000260653 ZNF507Q8TCN5 953 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 ODF2LQ9ULJ1 636 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 ITIH6Q6UXX5 1313 aa24.73■■□□□ 1.55
SIX3-201ENST00000260653 GCNT3O95395 438 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 ZNF131P52739 623 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 SMCR8Q8TEV9 937 aaPredicted RBP24.72■■□□□ 1.55
SIX3-201ENST00000260653 HIP1RO75146 1068 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 ICAM3P32942 547 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 COPB2P35606 906 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 RBL2Q08999 1139 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 MIIPQ5JXC2 388 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.72■■□□□ 1.55
SIX3-201ENST00000260653 SMAP1Q8IYB5 467 aaPredicted RBP24.72■■□□□ 1.55
SIX3-201ENST00000260653 DAW1Q8N136 415 aa24.72■■□□□ 1.55
SIX3-201ENST00000260653 LRRC37A2A6NM11 1700 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 FGFR1OPO95684 399 aaKnown RBP24.71■■□□□ 1.55
SIX3-201ENST00000260653 NMT1P30419 496 aaKnown RBP24.71■■□□□ 1.55
SIX3-201ENST00000260653 FKBP3Q00688 224 aaKnown RBP24.71■■□□□ 1.55
SIX3-201ENST00000260653 MAPK7Q13164 816 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 CPLX3Q8WVH0 158 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 FGD4Q96M96 766 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 MMP19Q99542 508 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 NOC4LQ9BVI4 516 aaKnown RBP24.71■■□□□ 1.55
SIX3-201ENST00000260653 PORCNQ9H237 461 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 GYPCP04921 128 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 ACTR2P61160 394 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 KCTD2Q14681 263 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 KNOP1Q1ED39 458 aaKnown RBP24.71■■□□□ 1.55
SIX3-201ENST00000260653 PLA2G4FQ68DD2 849 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 MAEAQ7L5Y9 396 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 FIZ1Q96SL8 496 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 TMX1Q9H3N1 280 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 GABBR1Q9UBS5 961 aa24.71■■□□□ 1.55
SIX3-201ENST00000260653 BACH1O14867 736 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 USO1O60763 962 aaKnown RBP24.7■■□□□ 1.54
SIX3-201ENST00000260653 KCNA1Q09470 495 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 PPFIBP1Q86W92 1011 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 CCDC43Q96MW1 224 aaKnown RBP24.7■■□□□ 1.54
SIX3-201ENST00000260653 BMT2Q1RMZ1 405 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 CYFIP1Q7L576 1253 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 EEPD1Q7L9B9 569 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 TMEM139Q8IV31 216 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 MROH8Q9H579 483 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 EFCC1Q9HA90 598 aa24.7■■□□□ 1.54
SIX3-201ENST00000260653 ZNFX1Q9P2E3 1918 aaKnown RBP24.69■■□□□ 1.54
SIX3-201ENST00000260653 TPM2P07951 284 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 ODR4Q5SWX8 454 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 CST9Q5W186 159 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 SWSAP1Q6NVH7 229 aa24.69■■□□□ 1.54
SIX3-201ENST00000260653 CCDC60Q8IWA6 550 aaPredicted RBP24.69■■□□□ 1.54
SIX3-201ENST00000260653 CCDC112Q8NEF3 446 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms