RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 ATP8B4Q8TF62 1192 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 PRO3102Q9H379 93 aa18.85■□□□□ 0.61
SDCBP-201ENST00000260130 COLQQ9Y215 455 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-201ENST00000260130 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 EML1O00423 815 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 HBP1O60381 514 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 RETREG2Q8NC44 543 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 DHX38Q92620 1227 aaKnown RBP18.84■□□□□ 0.61
SDCBP-201ENST00000260130 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
SDCBP-201ENST00000260130 TTC12Q9H892 705 aaPredicted RBP18.84■□□□□ 0.61
SDCBP-201ENST00000260130 IGSF9BQ9UPX0 1349 aa18.84■□□□□ 0.61
SDCBP-201ENST00000260130 CCL23P55773 120 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 IGBP1P78318 339 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 FPGSQ05932 587 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 SPIRE1Q08AE8 756 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 BBXQ8WY36 941 aaPredicted RBP18.83■□□□□ 0.61
SDCBP-201ENST00000260130 WNT8AQ9H1J5 351 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 PCDHB6Q9Y5E3 794 aa18.83■□□□□ 0.61
SDCBP-201ENST00000260130 MARCH8Q5T0T0 291 aa18.83■□□□□ 0.6
SDCBP-201ENST00000260130 TRMT1LQ7Z2T5 733 aaKnown RBP18.83■□□□□ 0.6
SDCBP-201ENST00000260130 ZNF862O60290 1169 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 CSF2RAP15509 400 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 RBL2Q08999 1139 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 EPHA7Q15375 998 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 UGCGQ16739 394 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 WNT8BQ93098 351 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 TUBE1Q9UJT0 475 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 MBLAC1A4D2B0 266 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-201ENST00000260130 ESPNB1AK53 854 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 OR52Z1P0C646 297 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
SDCBP-201ENST00000260130 ZNF484Q5JVG2 852 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 NCAPH2Q6IBW4 605 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 BRAPQ7Z569 592 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 C4orf32Q8N8J7 132 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 SCLYQ96I15 445 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 FAM167AQ96KS9 214 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 NRBP2Q9NSY0 501 aa18.82■□□□□ 0.6
SDCBP-201ENST00000260130 LTBP2Q14767 1821 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 CKBP12277 381 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 PPIGQ13427 754 aaKnown RBP eCLIP18.81■□□□□ 0.6
SDCBP-201ENST00000260130 FERMT3Q86UX7 667 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 TRAPPC12Q8WVT3 735 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
SDCBP-201ENST00000260130 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.81■□□□□ 0.6
SDCBP-201ENST00000260130 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
SDCBP-201ENST00000260130 IQCF3P0C7M6 154 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 PSMC5P62195 406 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 PRKCEQ02156 737 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 PTGDRQ13258 359 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
SDCBP-201ENST00000260130 COL1A2P08123 1366 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 STX6O43752 255 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 OATP04181 439 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 SELPP16109 830 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 THPOP40225 353 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 QARSP47897 775 aaKnown RBP18.8■□□□□ 0.6
SDCBP-201ENST00000260130 EPHB4P54760 987 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 TAF2Q6P1X5 1199 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 MTMR6Q9Y217 621 aa18.8■□□□□ 0.6
SDCBP-201ENST00000260130 ZBTB42B2RXF5 422 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 ZNF618Q5T7W0 954 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 RUFY4Q6ZNE9 571 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 LRRC8DQ7L1W4 858 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 LAD1O00515 517 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 DKC1O60832 514 aaKnown RBP eCLIP18.79■□□□□ 0.6
SDCBP-201ENST00000260130 KLRC1P26715 233 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 TECP42680 631 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 XKR3Q5GH77 459 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 MTHFD1LQ6UB35 978 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
SDCBP-201ENST00000260130 ZBTB10Q96DT7 871 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 IL23AQ9NPF7 189 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 PCDHA2Q9Y5H9 948 aa18.79■□□□□ 0.6
SDCBP-201ENST00000260130 A0A1W2PPC1 479 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 CAND2O75155 1236 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 RFC2P35250 354 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 NASPP49321 788 aaPredicted RBP18.78■□□□□ 0.6
SDCBP-201ENST00000260130 ZNF445P59923 1031 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 C16orf59Q7L2K0 433 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 TDHQ8IZJ6 230 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 DYDC2Q96IM9 177 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
SDCBP-201ENST00000260130 POTEMA6NI47 508 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 SLITRK3O94933 977 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 STBD1O95210 358 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
SDCBP-201ENST00000260130 PDIA4P13667 645 aaKnown RBP18.78■□□□□ 0.6
SDCBP-201ENST00000260130 RSPH3Q86UC2 560 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 HSD17B14Q9BPX1 270 aa18.78■□□□□ 0.6
SDCBP-201ENST00000260130 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
SDCBP-201ENST00000260130 LMBRD1Q9NUN5 540 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms