RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNF274Q96GC6 653 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 PAIP2Q9BPZ3 127 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 FHDC1Q9C0D6 1143 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 TDRD3Q9H7E2 651 aaKnown RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 ZSWIM4Q9H7M6 989 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 BCL2L12Q9HB09 334 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 PRDM10Q9NQV6 1147 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SENP1Q9P0U3 644 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ABI3Q9P2A4 366 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 SUCLA2Q9P2R7 463 aaPredicted RBP4.36□□□□□ -1.71
RNF38-201ENST00000259605 FBXO10Q9UK96 956 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ASAP1Q9ULH1 1129 aa4.36□□□□□ -1.71
RNF38-201ENST00000259605 ABCA8O94911 1581 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KDM5CP41229 1560 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 VWA3AA6NCI4 1184 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KRT87PA6NCN2 255 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 I3L4J1 428 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 NVLO15381 856 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 GH2P01242 217 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CD4P01730 458 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ERVK-10P10266 1014 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 HSPA6P17066 643 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 AP3M2P53677 418 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 HMGCS2P54868 508 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 TMEM132DQ14C87 1099 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 NCAPHQ15003 741 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ELF2Q15723 593 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 UAP1Q16222 522 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 PPP2R5EQ16537 467 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CDC37Q16543 378 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 SYTL3Q4VX76 610 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PPM1LQ5SGD2 360 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KRBA2Q6ZNG9 492 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SAMD7Q7Z3H4 446 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CTU1Q7Z7A3 348 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 ARHGEF25Q86VW2 580 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CMTR1Q8N1G2 835 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 SLAIN1Q8ND83 568 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 GRK7Q8WTQ7 553 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 GMCL1Q96IK5 515 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 NUF2Q9BZD4 464 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MAGEF1Q9HAY2 307 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 NLRC4Q9NPP4 1024 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 DNAJC11Q9NVH1 559 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 TMEM51Q9NW97 253 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ELOVL2Q9NXB9 296 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 STOML1Q9UBI4 398 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PIN4Q9Y237 131 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 MLH3Q9UHC1 1453 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 LAD1O00515 517 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SPTLC2O15270 562 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KLHL41O60662 606 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CTNND1O60716 968 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 LTKP29376 864 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 KRT20P35900 424 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 STAT1P42224 750 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 OR1G1P47890 313 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 RAB27AP51159 221 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 NMIQ13287 307 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNF38-201ENST00000259605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNF38-201ENST00000259605 SDCCAG3Q96C92 435 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 GDAP1L1Q96MZ0 367 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MTG1Q9BT17 334 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 NOC4LQ9BVI4 516 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 NFKBIZQ9BYH8 718 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 C6orf203Q9P0P8 240 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 POLKQ9UBT6 870 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 LUC7L2Q9Y383 392 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 EFCAB6Q5THR3 1501 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 COL15A1P39059 1388 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 RPAP1Q9BWH6 1393 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 ZMYM2Q9UBW7 1377 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PDE8BO95263 885 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 HARS2P49590 506 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 LMNB2Q03252 620 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PRKAA1Q13131 559 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SGCGQ13326 291 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 FYB2Q5VWT5 728 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 Q6ZUG5 572 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 EFCAB3Q8N7B9 438 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 TDRD7Q8NHU6 1098 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 GIMAP7Q8NHV1 300 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 MCOLN3Q8TDD5 553 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ZSCAN10Q96SZ4 725 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 CDK5RAP1Q96SZ6 601 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 VCXQ9H320 206 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 UXTQ9UBK9 157 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 USP18Q9UMW8 372 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 USP20Q9Y2K6 914 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 ZNF711Q9Y462 761 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 IGSF9BQ9UPX0 1349 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 HNRNPCL2B2RXH8 293 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 PDE2AO00408 941 aaPredicted RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 HNRNPCL1O60812 293 aaKnown RBP4.35□□□□□ -1.71
RNF38-201ENST00000259605 FGF19O95750 216 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 SLC4A1P02730 911 aa4.35□□□□□ -1.71
RNF38-201ENST00000259605 CTSHP09668 335 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms