RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 OXER1Q8TDS5 423 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 PGBD4Q96DM1 585 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 SUDS3Q9H7L9 328 aaPredicted RBP6.92□□□□□ -1.3
BRIP1-201ENST00000259008 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 NYAP2Q9P242 653 aa6.92□□□□□ -1.3
BRIP1-201ENST00000259008 GPR75-ASB3A0A0A6YYF3 556 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SLU7O95391 586 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 IFNAR1P17181 557 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 VCAM1P19320 739 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CIITAP33076 1130 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ITIH3Q06033 890 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 EXOC3L4Q17RC7 722 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CCDC157Q569K6 752 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 KRBA2Q6ZNG9 492 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 DDX53Q86TM3 631 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 RFX6Q8HWS3 928 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 MCPH1Q8NEM0 835 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SEPT5Q99719 369 aaPredicted RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CCDC77Q9BR77 488 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 MIS12Q9H081 205 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 C2orf40Q9H1Z8 148 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 UBN1Q9NPG3 1134 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 EMILIN3Q9NT22 766 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 POLR3EQ9NVU0 708 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 KIF13AQ9H1H9 1805 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF233A6NK53 670 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 MED7O43513 233 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF286BP0CG31 522 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 POLR2BP30876 1174 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PLCB4Q15147 1175 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PLEKHA4Q9H4M7 779 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CTAGE15A4D2H0 777 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 NEMP1O14524 444 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ADCY3O60266 1144 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 HSF2BPO75031 334 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CTAGE8P0CG41 777 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 TCF7P36402 384 aaPredicted RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF543Q08ER8 600 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 TRIM14Q14142 442 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SURF1Q15526 300 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 EFCAB12Q6NXP0 572 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PDZD4Q76G19 769 aaPredicted RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CTAGE6Q86UF2 777 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CTAGE4Q8IX94 777 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PCSK9Q8NBP7 692 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SHCBP1Q8NEM2 672 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 EIF2AK1Q9BQI3 630 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 MRPL4Q9BYD3 311 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ITGA4P13612 1032 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 RASA1P20936 1047 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 NOGQ13253 232 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 KRT33BQ14525 404 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SLC10A5Q5PT55 438 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 METTL14Q9HCE5 456 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 BARHL2Q9NY43 387 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF541Q9H0D2 1346 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 RNF8O76064 485 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ALDH7A1P49419 539 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF699Q32M78 642 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 ZNF667Q5HYK9 610 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 BBS5Q8N3I7 341 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CCNYQ8ND76 341 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SH3TC2Q8TF17 1288 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SCFD2Q8WU76 684 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 CNOT6LQ96LI5 555 aaKnown RBP6.91□□□□□ -1.3
BRIP1-201ENST00000259008 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 XPNPEP3Q9NQH7 507 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 PFDN4Q9NQP4 134 aa6.91□□□□□ -1.3
BRIP1-201ENST00000259008 DEPDC5O75140 1603 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 GLTPD2A6NH11 291 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 ORC4O43929 436 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 SAT1P21673 171 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 CDC27P30260 824 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-201ENST00000259008 HERVK_113P62684 666 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 BFSP2Q13515 415 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 GABPB2Q8TAK5 448 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-201ENST00000259008 SEPT1Q8WYJ6 367 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 SAAL1Q96ER3 474 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 EPSTI1Q96J88 318 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 ACAP3Q96P50 834 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 AAASQ9NRG9 546 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-201ENST00000259008 AFG3L2Q9Y4W6 797 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 USP32Q8NFA0 1604 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 ESYT2A0FGR8 921 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 AFPP02771 609 aaKnown RBP6.9□□□□□ -1.3
BRIP1-201ENST00000259008 PRKCBP05771 671 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
BRIP1-201ENST00000259008 MAN1A1P33908 653 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 EPHB1P54762 984 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 DAAM2Q86T65 1068 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 ASIC3Q9UHC3 531 aa6.9□□□□□ -1.3
BRIP1-201ENST00000259008 LARGE1O95461 756 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms