RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 EML1O00423 815 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 NBNO60934 754 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 RFC2P35250 354 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 IGBP1P78318 339 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 DEFB128Q7Z7B8 93 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 RDM1Q8NG50 284 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
CNN1-201ENST00000252456 OSBPL7Q9BZF2 842 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 GBF1Q92538 1859 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 LOXHD1Q8IVV2 1947 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 THPOP40225 353 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 MIER3Q7Z3K6 550 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 MTMR9Q96QG7 549 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 CXXC1Q9P0U4 656 aaPredicted RBP16.05■□□□□ 0.16
CNN1-201ENST00000252456 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
CNN1-201ENST00000252456 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
CNN1-201ENST00000252456 HBP1O60381 514 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 NEMFO60524 1076 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 CXCL10P02778 98 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 PFKMP08237 780 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 TCTN1Q2MV58 587 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
CNN1-201ENST00000252456 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
CNN1-201ENST00000252456 HERVK_113Q902F9 699 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 COL1A2P08123 1366 aa16.04■□□□□ 0.16
CNN1-201ENST00000252456 CAND2O75155 1236 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 STBD1O95210 358 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 FGBP02675 491 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 CTSHP09668 335 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 ATP2B1P20020 1258 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 TOB1P50616 345 aaPredicted RBP16.03■□□□□ 0.16
CNN1-201ENST00000252456 PRKCEQ02156 737 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 CALCRLQ16602 461 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
CNN1-201ENST00000252456 OTOP2Q7RTS6 562 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
CNN1-201ENST00000252456 ARID2Q68CP9 1835 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 K7ELQ4 463 aaPredicted RBP16.02■□□□□ 0.16
CNN1-201ENST00000252456 OATP04181 439 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 RSPH10BP0C881 870 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 MCM7P33993 719 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 NBR1Q14596 966 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 FAM26DQ5JW98 314 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 MTHFD1LQ6UB35 978 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 TRMT1LQ7Z2T5 733 aaKnown RBP16.02■□□□□ 0.16
CNN1-201ENST00000252456 BANK1Q8NDB2 785 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 DNAJB3Q8WWF6 145 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
CNN1-201ENST00000252456 SNX21Q969T3 373 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
CNN1-201ENST00000252456 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.16
CNN1-201ENST00000252456 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.15
CNN1-201ENST00000252456 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 C22orf31O95567 290 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 CHRNA1P02708 482 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 MGAT3Q09327 533 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 TTC38Q5R3I4 469 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 SMIM35A0A1B0GVV1 85 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 TMEM150BA6NC51 233 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 KLRC1P26715 233 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 GNL2Q13823 731 aaKnown RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 ZNF174Q15697 407 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 C4orf32Q8N8J7 132 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 TTC12Q9H892 705 aaPredicted RBP16.01■□□□□ 0.15
CNN1-201ENST00000252456 PCDHA12Q9UN75 941 aa16.01■□□□□ 0.15
CNN1-201ENST00000252456 BAG4O95429 457 aaKnown RBP16■□□□□ 0.15
CNN1-201ENST00000252456 TXKP42681 527 aa16■□□□□ 0.15
CNN1-201ENST00000252456 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
CNN1-201ENST00000252456 EPHA7Q15375 998 aa16■□□□□ 0.15
CNN1-201ENST00000252456 TARBP2Q15633 366 aaKnown RBP16■□□□□ 0.15
CNN1-201ENST00000252456 LARP1BQ659C4 914 aaKnown RBP16■□□□□ 0.15
CNN1-201ENST00000252456 NCAPH2Q6IBW4 605 aa16■□□□□ 0.15
CNN1-201ENST00000252456 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
CNN1-201ENST00000252456 RGL1Q9NZL6 768 aa16■□□□□ 0.15
CNN1-201ENST00000252456 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
CNN1-201ENST00000252456 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 H3BQV1 296 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 MARCH6O60337 910 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 PSMC5P62195 406 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 MRPS6P82932 125 aaKnown RBP15.99■□□□□ 0.15
CNN1-201ENST00000252456 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
CNN1-201ENST00000252456 PLEKHG4Q58EX7 1191 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 XKR3Q5GH77 459 aa15.99■□□□□ 0.15
CNN1-201ENST00000252456 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms