RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 SEMA4AQ9H3S1 761 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 ABCB4P21439 1286 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 PMS2P54278 862 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 GIMAP8Q8ND71 665 aaPredicted RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 MRRFQ96E11 262 aaKnown RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 ADAM33Q9BZ11 813 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 GREM2Q9H772 168 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 KLHL14Q9P2G3 628 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 PTPN22Q9Y2R2 807 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 SUGT1Q9Y2Z0 365 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 SP100P23497 879 aaPredicted RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 DEUP1Q05D60 604 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 FAM83BQ5T0W9 1011 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 APBB1IPQ7Z5R6 666 aaPredicted RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 ANKS1AQ92625 1134 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 ERGIC2Q96RQ1 377 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 WDR19Q8NEZ3 1342 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 CCDC169A6NNP5 214 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 TMEM110-MUSTN1A8MSY1 372 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 ASAP2O43150 1006 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 PIGWQ7Z7B1 504 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 PHC3Q8NDX5 983 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 ATXN2LQ8WWM7 1075 aaKnown RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 DHTKD1Q96HY7 919 aaPredicted RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 SEMA6BQ9H3T3 888 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 SCOCQ9UIL1 159 aa19.85■□□□□ 0.77
PTPN12-201ENST00000248594 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
PTPN12-201ENST00000248594 SRRM3A6NNA2 597 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 GCLCP48506 637 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 NAB2Q15742 525 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 CCDC84Q86UT8 332 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 GLIS3Q8NEA6 775 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 PLBD2Q8NHP8 589 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 FBXO25Q8TCJ0 367 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 DYDC2Q96IM9 177 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 RNF26Q9BY78 433 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 PIK3C2AO00443 1686 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 MYH7BA7E2Y1 1941 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 KLRC4O43908 158 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 MRPS35P82673 323 aaKnown RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 MYLK4Q86YV6 388 aaPredicted RBP19.84■□□□□ 0.77
PTPN12-201ENST00000248594 MAIP1Q8WWC4 291 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
PTPN12-201ENST00000248594 CREB3O43889 395 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 ERP27Q96DN0 273 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 GPR108Q9NPR9 543 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 TOPAZ1Q8N9V7 1692 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 PFDN1O60925 122 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 GH1P01241 217 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 SEPT2Q15019 361 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 LETM2Q2VYF4 491 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 FAM47AQ5JRC9 791 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 CABP7Q86V35 215 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 ABTB1Q969K4 478 aaPredicted RBP19.83■□□□□ 0.77
PTPN12-201ENST00000248594 SIK3Q9Y2K2 1263 aa19.83■□□□□ 0.77
PTPN12-201ENST00000248594 RASGRF2O14827 1237 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 PAEPP09466 180 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 KCNA3P22001 575 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 STX2P32856 288 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 TECP42680 631 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 CASP7P55210 303 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 EVX2Q03828 476 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 TCP11L1Q9NUJ3 509 aa19.83■□□□□ 0.76
PTPN12-201ENST00000248594 ACTN1P12814 892 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 PTDSS1P48651 473 aaKnown RBP19.82■□□□□ 0.76
PTPN12-201ENST00000248594 KCNMA1Q12791 1236 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 ASIC2Q16515 512 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 MAN2A1Q16706 1144 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.82■□□□□ 0.767e-9■■□□□ 12.7
PTPN12-201ENST00000248594 RGPD2P0DJD1 1756 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 TLR2O60603 784 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 EPHB2P29323 1055 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 ZNF131P52739 623 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 RNF25Q96BH1 459 aaPredicted RBP19.82■□□□□ 0.76
PTPN12-201ENST00000248594 DAAM1Q9Y4D1 1078 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 TMEM120BA0PK00 339 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.82■□□□□ 0.767e-12■■■□□ 18.7
PTPN12-201ENST00000248594 WDR35Q9P2L0 1181 aa19.82■□□□□ 0.76
PTPN12-201ENST00000248594 PEX5P50542 639 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 CACNB1Q02641 598 aaPredicted RBP19.81■□□□□ 0.76
PTPN12-201ENST00000248594 DBN1Q16643 649 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 LRRC15Q8TF66 581 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 BAP1Q92560 729 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 CTNNAL1Q9UBT7 734 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 LNPEPQ9UIQ6 1025 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 RGPD1P0DJD0 1748 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 GSG1L2A8MUP6 293 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 RHOBTB3O94955 611 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 FGFR1OPO95684 399 aaKnown RBP19.81■□□□□ 0.76
PTPN12-201ENST00000248594 TCERG1LQ5VWI1 586 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 PIGOQ8TEQ8 1089 aa19.81■□□□□ 0.76
PTPN12-201ENST00000248594 SNRNP27Q8WVK2 155 aaKnown RBP19.81■□□□□ 0.76
PTPN12-201ENST00000248594 ISLR2Q6UXK2 745 aa19.8■□□□□ 0.76
PTPN12-201ENST00000248594 TEX9Q8N6V9 391 aa19.8■□□□□ 0.76
PTPN12-201ENST00000248594 ESR2Q92731 530 aa19.8■□□□□ 0.76
PTPN12-201ENST00000248594 PBKQ96KB5 322 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms