RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 FRMD3A2A2Y4 597 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GBP1P32455 592 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 EPHA7Q15375 998 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 CABS1Q96KC9 395 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 KIAA1586Q9HCI6 787 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GINS2Q9Y248 185 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GNGT1P63211 74 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 C7orf25Q9BPX7 421 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 EDEM3Q9BZQ6 932 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 ZNF142P52746 1687 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 PALM3A6NDB9 673 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 COBLO75128 1261 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 RNF40O75150 1001 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GCKP35557 465 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 CALR3Q96L12 384 aaKnown RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 NHEJ1Q9H9Q4 299 aaPredicted RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 TYW1Q9NV66 732 aaKnown RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 ADAMTSL3P82987 1691 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 C19orf81C9J6K1 198 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 IQCB1Q15051 598 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 TCP11Q8WWU5 503 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 CEP72Q9P209 647 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 CIB2O75838 187 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 CEP85LQ5SZL2 805 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 CCDC63Q8NA47 563 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 COMMD10Q9Y6G5 202 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 ARHGAP24Q8N264 748 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 STMN2Q93045 179 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
SIN3B-201ENST00000248054 KCNK3O14649 394 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 MXI1P50539 228 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 DPYDQ12882 1025 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 GRK7Q8WTQ7 553 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
SIN3B-201ENST00000248054 QARSP47897 775 aaKnown RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 NEDD9Q14511 834 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 KIF22Q14807 665 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 CLIC2O15247 247 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 EYA4O95677 639 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 ABCB4P21439 1286 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 SPP2Q13103 211 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 LMNTD2Q8IXW0 634 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 CACNA2D3Q8IZS8 1091 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 POTEB3A0JP26 581 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 POTECB2RU33 542 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 E9PMD0 336 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 KNOP1Q1ED39 458 aaKnown RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 POTEBQ6S5H4 581 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 SFR1Q86XK3 245 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 EEF2KMTQ96G04 330 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 TRIM9Q9C026 710 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
SIN3B-201ENST00000248054 PLSCR1O15162 318 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 RASSF7Q02833 373 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 PADI6Q6TGC4 694 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 KCND2Q9NZV8 630 aa17.1■□□□□ 0.33
SIN3B-201ENST00000248054 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 RHOBTB3O94955 611 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 TTBK2Q6IQ55 1244 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 SOWAHDA6NJG2 315 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
SIN3B-201ENST00000248054 RASA3Q14644 834 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 CCDC105Q8IYK2 499 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 CAPS2Q9BXY5 557 aa17.09■□□□□ 0.33
SIN3B-201ENST00000248054 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms