RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 DYDC1Q8WWB3 177 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.54
SGPP1-201ENST00000247225 LRRC45Q96CN5 670 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 LZTS2Q9BRK4 669 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 SLC40A1Q9NP59 571 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 AJAP1Q9UKB5 411 aaPredicted RBP18.39■□□□□ 0.54
SGPP1-201ENST00000247225 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.54
SGPP1-201ENST00000247225 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 SKOR1P84550 965 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 UAP1Q16222 522 aaPredicted RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 ZNF662Q6ZS27 426 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 VPS36Q86VN1 386 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 CACNA2D3Q8IZS8 1091 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 DAGLBQ8NCG7 672 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 RAPGEF5Q92565 580 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 THOC1Q96FV9 657 aaKnown RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 FOXO6A8MYZ6 492 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 VPS41P49754 854 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 ZC2HC1CQ53FD0 456 aaPredicted RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 GLE1Q53GS7 698 aaKnown RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 HIBCHQ6NVY1 386 aaPredicted RBP18.39■□□□□ 0.53
SGPP1-201ENST00000247225 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 SPICE1Q8N0Z3 855 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 ARFGAP2Q8N6H7 521 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 CUL5Q93034 780 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 COL18A1P39060 1754 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 CHD4Q14839 1912 aa18.39■□□□□ 0.53
SGPP1-201ENST00000247225 HMGB1P1B2RPK0 211 aaPredicted RBP18.38■□□□□ 0.53
SGPP1-201ENST00000247225 LMTK3Q96Q04 1460 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 JMJD4Q9H9V9 463 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 TPH2Q8IWU9 490 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 CYP2W1Q8TAV3 490 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 TMBIM4Q9HC24 238 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 PJA2O43164 708 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 CAND2O75155 1236 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 TBCAO75347 108 aaKnown RBP18.38■□□□□ 0.53
SGPP1-201ENST00000247225 FLOT1O75955 427 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 FAM107AO95990 144 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 SHBGP04278 402 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
SGPP1-201ENST00000247225 ELAC2Q9BQ52 826 aaKnown RBP18.38■□□□□ 0.53
SGPP1-201ENST00000247225 CXorf56Q9H5V9 222 aa18.38■□□□□ 0.53
SGPP1-201ENST00000247225 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 PPP1R11O60927 126 aaPredicted RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 AKAP3O75969 853 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 GALCP54803 685 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 EP400NLQ6ZTU2 488 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 TBC1D1Q86TI0 1168 aaPredicted RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 TRIM59Q8IWR1 403 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 MYCT1Q8N699 235 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 SEC16BQ96JE7 1060 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 DDX39AO00148 427 aaKnown RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 CYP11B2P19099 503 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 NMT1P30419 496 aaKnown RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 ANKRD42Q8N9B4 389 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 TACO1Q9BSH4 297 aaKnown RBP18.37■□□□□ 0.53
SGPP1-201ENST00000247225 ALS2Q96Q42 1657 aa18.37■□□□□ 0.53
SGPP1-201ENST00000247225 DNM1LO00429 736 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 NF2P35240 595 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 MSL1Q68DK7 614 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 CCDC26Q8TAB7 109 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 AMFRQ9UKV5 643 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 EPB41P11171 864 aaKnown RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 CDC25CP30307 473 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 PPP2R2AP63151 447 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 GPSM2P81274 684 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 UBAP2Q5T6F2 1119 aaKnown RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 N4BP2L2Q92802 583 aaPredicted RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 MRRFQ96E11 262 aaKnown RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 LRRC27Q9C0I9 530 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 ISCUQ9H1K1 167 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 PCIF1Q9H4Z3 704 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 CD209Q9NNX6 404 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 DBR1Q9UK59 544 aaKnown RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 ZBTB21Q9ULJ3 1066 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 FGFR4P22455 802 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 PON1P27169 355 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 KCNJ1P48048 391 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 COG2Q14746 738 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 TRIP13Q15645 432 aaPredicted RBP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
SGPP1-201ENST00000247225 REEP2Q9BRK0 252 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 ADAM33Q9BZ11 813 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 PPP1R9AQ9ULJ8 1098 aa18.36■□□□□ 0.53
SGPP1-201ENST00000247225 ATMINO43313 823 aaPredicted RBP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 EDIL3O43854 480 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 ZKSCAN8Q15776 578 aaPredicted RBP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 GKAP1Q5VSY0 366 aaPredicted RBP18.35■□□□□ 0.53
SGPP1-201ENST00000247225 TPCN2Q8NHX9 752 aa18.35■□□□□ 0.53
SGPP1-201ENST00000247225 KCNK9Q9NPC2 374 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms