RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
EFNB2-201ENST00000245323 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
EFNB2-201ENST00000245323 GOLGA6BA6NDN3 693 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
EFNB2-201ENST00000245323 DGKZQ13574 1117 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 TFDP1Q14186 410 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 TCP11X2Q5H9J9 407 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 EARS2Q5JPH6 523 aaKnown RBP12.38□□□□□ -0.43
EFNB2-201ENST00000245323 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 ABI1Q8IZP0 508 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 TRIM58Q8NG06 486 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 MAGEF1Q9HAY2 307 aa12.38□□□□□ -0.43
EFNB2-201ENST00000245323 NFIBO00712 420 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 SHMT1P34896 483 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 RCAN1P53805 252 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 MTF1Q14872 753 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 P4HBP07237 508 aaKnown RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 EPHX2P34913 555 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 TGFB2P61812 414 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ZNF302Q9NR11 478 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 TBC1D22BQ9NU19 505 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 KRIT1O00522 736 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 CAPN9O14815 690 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 KIF4AO95239 1232 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 PDE6CP51160 858 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ST3GAL1Q11201 340 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 C10orf67Q8IYJ2 551 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 NWD1Q149M9 1564 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 CLDN3O15551 220 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 MOCS3O95396 460 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 CTSHP09668 335 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 ZNF746Q6NUN9 644 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
EFNB2-201ENST00000245323 PCDHA10Q9Y5I2 948 aa12.37□□□□□ -0.43
EFNB2-201ENST00000245323 FAM205AQ6ZU69 1335 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 GOLGA6CA6NDK9 693 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 THAP12O43422 761 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 NR3C1P04150 777 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 GOLGA6DP0CG33 693 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 ATP1A2P50993 1020 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 PTK2Q05397 1052 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 TTC19Q6DKK2 380 aaPredicted RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 HACE1Q8IYU2 909 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 GOLGA6AQ9NYA3 693 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 KRT76Q01546 638 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 PASD1Q8IV76 773 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 LPAR1Q92633 364 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 EBAG9O00559 213 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 HIP1RO75146 1068 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 VIMP08670 466 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 USP11P51784 963 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 FASTKD5Q7L8L6 764 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 DHX40Q8IX18 779 aaKnown RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 KIFC3Q9BVG8 833 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 JPH1Q9HDC5 661 aaPredicted RBP12.36□□□□□ -0.43
EFNB2-201ENST00000245323 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
EFNB2-201ENST00000245323 MYMKA6NI61 221 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 NDUFA10O95299 355 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 NSFP46459 744 aaKnown RBP12.35□□□□□ -0.43
EFNB2-201ENST00000245323 GUCY2DQ02846 1103 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 KCTD16Q68DU8 428 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 RNF149Q8NC42 400 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 SLC9A2Q9UBY0 812 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 KRT71Q3SY84 523 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 GPR161Q8N6U8 529 aaKnown RBP12.35□□□□□ -0.43
EFNB2-201ENST00000245323 PDLIM2Q96JY6 352 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
EFNB2-201ENST00000245323 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 H0YCG3 227 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 STAT5BP51692 787 aa12.35□□□□□ -0.43
EFNB2-201ENST00000245323 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms