RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PACSIN2Q9UNF0 486 aaPredicted RBP21.4■■□□□ 1.02
SOX4-201ENST00000244745 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 CCDC188H7C350 402 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 APBA3O96018 575 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 BASP1P80723 227 aaKnown RBP21.4■■□□□ 1.02
SOX4-201ENST00000244745 PIGOQ8TEQ8 1089 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 CFAP36Q96G28 342 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 CEP170P1Q96L14 293 aa21.4■■□□□ 1.02
SOX4-201ENST00000244745 E9PMD0 336 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 SAAL1Q96ER3 474 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 DNAJC24Q6P3W2 148 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 ATP6V0A1Q93050 837 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 IRX2Q9BZI1 471 aaPredicted RBP21.39■■□□□ 1.02
SOX4-201ENST00000244745 MIS12Q9H081 205 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 NOD1Q9Y239 953 aa21.39■■□□□ 1.02
SOX4-201ENST00000244745 TNFAIP1Q13829 316 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 FAM160B1Q5W0V3 765 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 SFR1Q86XK3 245 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 MAP7D3Q8IWC1 876 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 THOC1Q96FV9 657 aaKnown RBP21.39■■□□□ 1.01
SOX4-201ENST00000244745 MRPL47Q9HD33 250 aaKnown RBP21.39■■□□□ 1.01
SOX4-201ENST00000244745 TTC36A6NLP5 189 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 PDE1BQ01064 536 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.39■■□□□ 1.01
SOX4-201ENST00000244745 CPDO75976 1380 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 RWDD2BP57060 319 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 VSNL1P62760 191 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 ATG9AQ7Z3C6 839 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 ANKRD36BP1Q96IX9 119 aa21.39■■□□□ 1.01
SOX4-201ENST00000244745 CPP00450 1065 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 MT-ND3P03897 115 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 PRDX5P30044 214 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 NUGGCQ68CJ6 796 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 NCAPG2Q86XI2 1143 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 LRRC43Q8N309 656 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 DIS3Q9Y2L1 958 aaKnown RBP21.38■■□□□ 1.01
SOX4-201ENST00000244745 MCF2LO15068 1137 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 SERPINB2P05120 415 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 TMED1Q13445 227 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.38■■□□□ 1.01
SOX4-201ENST00000244745 ANGPTL2Q9UKU9 493 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 ALX1Q15699 326 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 DARS2Q6PI48 645 aaKnown RBP21.38■■□□□ 1.01
SOX4-201ENST00000244745 PROM2Q8N271 834 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 IFT122Q9HBG6 1241 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 CTIFO43310 598 aaKnown RBP21.38■■□□□ 1.01
SOX4-201ENST00000244745 ECE1P42892 770 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 MAGOHP61326 146 aaKnown RBP21.38■■□□□ 1.01
SOX4-201ENST00000244745 ITKQ08881 620 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 RHOT2Q8IXI1 618 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 KCTD6Q8NC69 237 aa21.38■■□□□ 1.01
SOX4-201ENST00000244745 RCAN1P53805 252 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 SMYD2Q9NRG4 433 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 ADPGKQ9BRR6 497 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 SETD1BQ9UPS6 1966 aaKnown RBP21.37■■□□□ 1.01
SOX4-201ENST00000244745 FCER1AP12319 257 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 KCNH2Q12809 1159 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 GRM4Q14833 912 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 ZBTB33Q86T24 672 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 ZNF710Q8N1W2 664 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 NACA2Q9H009 215 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 GMNCA6NCL1 334 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 ZNF185O15231 689 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 KIF1CO43896 1103 aaKnown RBP21.37■■□□□ 1.01
SOX4-201ENST00000244745 NBPF9Q3BBW0 867 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 NR3C1P04150 777 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 MIS18BP1Q6P0N0 1132 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 KCNV2Q8TDN2 545 aa21.37■■□□□ 1.01
SOX4-201ENST00000244745 CD58P19256 250 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 ATP2C1P98194 919 aaPredicted RBP21.36■■□□□ 1.01
SOX4-201ENST00000244745 GADL1Q6ZQY3 521 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 MMEL1Q495T6 779 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 PDZD4Q76G19 769 aaPredicted RBP21.36■■□□□ 1.01
SOX4-201ENST00000244745 SLC44A5Q8NCS7 719 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 KLC4Q9NSK0 619 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 M0QZ92 97 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 IFRD2Q12894 506 aaPredicted RBP21.36■■□□□ 1.01
SOX4-201ENST00000244745 FAM83BQ5T0W9 1011 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 RAPH1Q70E73 1250 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 SGMS1Q86VZ5 419 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 POLD4Q9HCU8 107 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 CDHR2Q9BYE9 1310 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 GRAPQ13588 217 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 GRAPLQ8TC17 118 aaPredicted RBP21.36■■□□□ 1.01
SOX4-201ENST00000244745 FAM81BQ96LP2 452 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 CAPN11Q9UMQ6 739 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 PCDHA6Q9UN73 950 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 PCDHA8Q9Y5H6 950 aa21.36■■□□□ 1.01
SOX4-201ENST00000244745 ACTN1P12814 892 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 ARHGAP4P98171 946 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 FAM196AQ6ZSG2 479 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.35■■□□□ 1.01
SOX4-201ENST00000244745 DCP1AQ9NPI6 582 aaPredicted RBP21.35■■□□□ 1.01
SOX4-201ENST00000244745 LRRIQ1Q96JM4 1722 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 SPECC1L-ADORA2AF8WAN1 911 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 CCND2P30279 289 aa21.35■■□□□ 1.01
SOX4-201ENST00000244745 TRIM42Q8IWZ5 723 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms