RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 DNAJC8O75937 253 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP17L8P0C7I0 530 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 TMED1Q13445 227 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 REXO1Q8N1G1 1221 aaKnown RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 MAGEC3Q8TD91 643 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 NEUROG2Q9H2A3 272 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 ARPP21Q9UBL0 812 aaPredicted RBP10.06□□□□□ -0.8
SRSF6-201ENST00000244020 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
SRSF6-201ENST00000244020 AKAP11Q9UKA4 1901 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 POTEMA6NI47 508 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 TLR2O60603 784 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 PRMT1Q99873 361 aaKnown RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 ZMYND12Q9H0C1 365 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 AMFRQ9UKV5 643 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 RGPD5Q99666 1765 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 DIAPH2O60879 1101 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 GNA14O95837 355 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 GHRP10912 638 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 DRD4P21917 467 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 ZNF131P52739 623 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 CACNB1Q02641 598 aaPredicted RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 PTK2Q05397 1052 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 U2AF1L4Q8WU68 220 aaKnown RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 SYN2Q92777 582 aaPredicted RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 KLHL29Q96CT2 875 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 DYNLL2Q96FJ2 89 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 NIP7Q9Y221 180 aaKnown RBP eCLIP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 MGRN1O60291 552 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 OPHN1O60890 802 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 GBP1P32455 592 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 BYSLQ13895 437 aaKnown RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 LACTB2Q53H82 288 aaPredicted RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 TRPM8Q7Z2W7 1104 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 PROM2Q8N271 834 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
SRSF6-201ENST00000244020 TSC22D3Q99576 134 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 FAM167BQ9BTA0 163 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 ATP8A2Q9NTI2 1148 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 DAAM1Q9Y4D1 1078 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 LRP6O75581 1613 aa10.05□□□□□ -0.8
SRSF6-201ENST00000244020 F8VZ95 297 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 STXBP3O00186 592 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 CDC25CP30307 473 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 TNNI2P48788 182 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 C10orf76Q5T2E6 689 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 CCDC65Q8IXS2 484 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 CCHCR1Q8TD31 782 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 ACTRT1Q8TDG2 376 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 FAM129AQ9BZQ8 928 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 STMN4Q9H169 189 aaPredicted RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 SLITRK6Q9H5Y7 841 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 AZI2Q9H6S1 392 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■□□□□ 9.5
SRSF6-201ENST00000244020 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 ABCB11O95342 1321 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 H0YGN5 161 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 ACTN1P12814 892 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 ABCB4P21439 1286 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 IRX1P78414 480 aaPredicted RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 DR1Q01658 176 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 MAP7Q14244 749 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 PSMD6Q15008 389 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 EIF1ADQ8N9N8 165 aaKnown RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 NFS1Q9Y697 457 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 FLT1P17948 1338 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 CFAP73A6NFT4 308 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 STAMBPO95630 424 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 PMS2P54278 862 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 SLC8A3P57103 927 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 MECOMQ03112 1051 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 CAPRIN2Q6IMN6 1127 aaKnown RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 ZNF513Q8N8E2 541 aaPredicted RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 SCFD2Q8WU76 684 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 TRIM7Q9C029 511 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 MTRF1LQ9UGC7 380 aaKnown RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 SNX24Q9Y343 169 aa10.04□□□□□ -0.8
SRSF6-201ENST00000244020 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
SRSF6-201ENST00000244020 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 GRB10Q13322 594 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 ERMARDQ5T6L9 678 aa10.03□□□□□ -0.8
SRSF6-201ENST00000244020 RAD54LQ92698 747 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms