RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 OPTNQ96CV9 577 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 MTMR8Q96EF0 704 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 CCDC17Q96LX7 622 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 WRNIP1Q96S55 665 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 USP26Q9BXU7 913 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 SAP30BPQ9UHR5 308 aaKnown RBP4.07□□□□□ -1.76
UFM1-201ENST00000239878 TMX2Q9Y320 296 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 MRPS23Q9Y3D9 190 aaKnown RBP4.07□□□□□ -1.76
UFM1-201ENST00000239878 NUB1Q9Y5A7 615 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 MRFAP1Q9Y605 127 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 MYPNQ86TC9 1320 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 HTTP42858 3142 aa4.07□□□□□ -1.76
UFM1-201ENST00000239878 LRRC10BA6NIK2 292 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 UBE2Q2LH0YL09 131 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 GADD45BO75293 160 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 RANBP1P43487 201 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 PICALMQ13492 652 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MORC3Q14149 939 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 PDIA5Q14554 519 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CDCA2Q69YH5 1023 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 BTNL9Q6UXG8 535 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 TRIM42Q8IWZ5 723 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 RBM12BQ8IXT5 1001 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 SPICE1Q8N0Z3 855 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 RDH13Q8NBN7 331 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CXorf38Q8TB03 319 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 FBF1Q8TES7 1133 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 BICD1Q96G01 975 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 GMCL1Q96IK5 515 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 TMX3Q96JJ7 454 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CAPNS2Q96L46 248 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MAP3K14Q99558 947 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 EPC1Q9H2F5 836 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.06□□□□□ -1.76
UFM1-201ENST00000239878 MCM9Q9NXL9 1143 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MTMR4Q9NYA4 1195 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 GGT7Q9UJ14 662 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 INTUQ9ULD6 942 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ODF2LQ9ULJ1 636 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MAPK8IP1Q9UQF2 711 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ATP2A1O14983 1001 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MBD3O95983 291 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SETSIPP0DME0 302 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 BCRP11274 1271 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CASTP20810 708 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 MRPL12P52815 198 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 RCAN1P53805 252 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 NOGQ13253 232 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 KCTD2Q14681 263 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SKIDA1Q1XH10 827 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 PREPLQ4J6C6 727 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 FAM83BQ5T0W9 1011 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 THEMIS2Q5TEJ8 643 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MEI1Q5TIA1 1274 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CYB5R4Q7L1T6 521 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 DDX42Q86XP3 938 aaKnown RBP eCLIP4.06□□□□□ -1.76
UFM1-201ENST00000239878 IGDCC4Q8TDY8 1250 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 EZH1Q92800 747 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 TTC14Q96N46 770 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CLIC6Q96NY7 704 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ASPSCR1Q9BZE9 553 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 NIF3L1Q9GZT8 377 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MORF4L1Q9UBU8 362 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 AGTPBP1Q9UPW5 1226 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 RBM8AQ9Y5S9 174 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 MANSC4A6NHS7 340 aaPredicted RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 KRT18P05783 430 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 HLA-DOAP06340 250 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ASNSP08243 561 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MCM2P49736 904 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SCNN1BP51168 640 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 GTF2A2P52657 109 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 BACE1P56817 501 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 HUNKP57058 714 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 HTRA3P83110 453 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SLC7A5Q01650 507 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 HLTFQ14527 1009 aaKnown RBP eCLIP4.06□□□□□ -1.76
UFM1-201ENST00000239878 DEFB115Q30KQ5 88 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 RNF20Q5VTR2 975 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CREB3L3Q68CJ9 461 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ISM2Q6H9L7 571 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 CYP4F22Q6NT55 531 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 NYAP1Q6ZVC0 841 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 MIGA2Q7L4E1 593 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SPATA21Q7Z572 469 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 SGMS1Q86VZ5 419 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 IQCA1Q86XH1 822 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ZNF280CQ8ND82 737 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 USP6NLQ92738 828 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 TM6SF1Q9BZW5 370 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 TSGA10Q9BZW7 698 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 PHACTR1Q9C0D0 580 aa4.06□□□□□ -1.76
UFM1-201ENST00000239878 ANGEL1Q9UNK9 670 aaKnown RBP4.06□□□□□ -1.76
UFM1-201ENST00000239878 A0A087X0B3 334 aa4.05□□□□□ -1.76
UFM1-201ENST00000239878 BTBD19C9JJ37 291 aa4.05□□□□□ -1.76
UFM1-201ENST00000239878 E7EWF7 191 aa4.05□□□□□ -1.76
UFM1-201ENST00000239878 OPLAHO14841 1288 aa4.05□□□□□ -1.76
UFM1-201ENST00000239878 ZBTB39O15060 712 aa4.05□□□□□ -1.76
UFM1-201ENST00000239878 PPP1R12BO60237 982 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms