RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KCND2Q9NZV8 630 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 SEL1LQ9UBV2 794 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 CAPN6Q9Y6Q1 641 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 AFPP02771 609 aaKnown RBP17.78■□□□□ 0.44
UBE3D-201ENST00000237186 GHRHRQ02643 423 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 GFPT1Q06210 699 aaPredicted RBP17.78■□□□□ 0.44
UBE3D-201ENST00000237186 EPHA7Q15375 998 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 CREG2Q8IUH2 290 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 DYDC2Q96IM9 177 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 ALS2CR12Q96Q35 445 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 VEZTQ9HBM0 779 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 PRDM4Q9UKN5 801 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 COL4A5P29400 1685 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 ASTN1O14525 1302 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 KIF13BQ9NQT8 1826 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 AKAP3O75969 853 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 POLD1P28340 1107 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 ZNF131P52739 623 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 TGFB2P61812 414 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 CTTNQ14247 550 aaKnown RBP17.78■□□□□ 0.44
UBE3D-201ENST00000237186 SLC18A3Q16572 532 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 IQCEQ6IPM2 695 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 RIT2Q99578 217 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 CRACR2AQ9BSW2 395 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 MLXIPQ9HAP2 919 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
UBE3D-201ENST00000237186 GOLGB1Q14789 3259 aaKnown RBP17.77■□□□□ 0.44
UBE3D-201ENST00000237186 TGFB1I1O43294 461 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 GAS7O60861 476 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 MOCS3O95396 460 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 NR3C1P04150 777 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 XRCC5P13010 732 aaKnown RBP17.77■□□□□ 0.43
UBE3D-201ENST00000237186 TCP1P17987 556 aaKnown RBP17.77■□□□□ 0.43
UBE3D-201ENST00000237186 EPS15P42566 896 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 HSD17B4P51659 736 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 TDRD12Q587J7 1177 aaKnown RBP17.77■□□□□ 0.43
UBE3D-201ENST00000237186 TPH2Q8IWU9 490 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 BORCS6Q96GS4 357 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 NOX5Q96PH1 765 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 PIM2Q9P1W9 311 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 UBE4BO95155 1302 aa17.77■□□□□ 0.43
UBE3D-201ENST00000237186 GTPBP10A4D1E9 387 aaKnown RBP17.76■□□□□ 0.43
UBE3D-201ENST00000237186 PDE2AO00408 941 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-201ENST00000237186 FAM13AO94988 1023 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 GCNT3O95395 438 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 ICAM1P05362 532 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 BCRP11274 1271 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 KLHDC7AQ5VTJ3 777 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 NIM1KQ8IY84 436 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 FIZ1Q96SL8 496 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 PARVGQ9HBI0 331 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
UBE3D-201ENST00000237186 FRMPD4Q14CM0 1322 aa17.76■□□□□ 0.43
UBE3D-201ENST00000237186 WNT10BO00744 389 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ARP10275 920 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 EPB41P11171 864 aaKnown RBP17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ANXA13P27216 316 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 RASSF7Q02833 373 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 EXOC3L4Q17RC7 722 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 MMGT1Q8N4V1 131 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF577Q9BSK1 485 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 MKNK1Q9BUB5 465 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 TSKSQ9UJT2 592 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 HYOU1Q9Y4L1 999 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF185O15231 689 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 UCHL3P15374 230 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 GUCY2CP25092 1073 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 PON1P27169 355 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 CXCL9Q07325 125 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 NAB2Q15742 525 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 NIPA1Q7RTP0 329 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 IRF2BP2Q7Z5L9 587 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 NEK9Q8TD19 979 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 SLC35C1Q96A29 364 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 CAPZA3Q96KX2 299 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 OSBPL9Q96SU4 736 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 TEKT3Q9BXF9 490 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 GLIS2Q9BZE0 524 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-201ENST00000237186 UNC45AQ9H3U1 944 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 ZNF536O15090 1300 aa17.75■□□□□ 0.43
UBE3D-201ENST00000237186 BTNL10A8MVZ5 291 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 SLC9A1P19634 815 aa17.74■□□□□ 0.43
UBE3D-201ENST00000237186 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
UBE3D-201ENST00000237186 PRKCIP41743 596 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms