RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 DBNLQ9UJU6 430 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 ERBB3P21860 1342 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 THOC5Q13769 683 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 CCDC28BQ9BUN5 200 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 IQSEC2Q5JU85 1478 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 RSPH10B2B2RC85 870 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 COQ9O75208 318 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 MMP1P03956 469 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 RSPH10BP0C881 870 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 GNAQP50148 359 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 KCNJ2P63252 427 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 PPIDQ08752 370 aaKnown RBP13.83□□□□□ -0.19
VAMP4-201ENST00000236192 ZBTB8BQ8NAP8 495 aaPredicted RBP13.83□□□□□ -0.19
VAMP4-201ENST00000236192 SPATA17Q96L03 361 aa13.83□□□□□ -0.19
VAMP4-201ENST00000236192 ROPN1BQ9BZX4 212 aaPredicted RBP13.83□□□□□ -0.19
VAMP4-201ENST00000236192 ROPN1Q9HAT0 212 aaPredicted RBP13.83□□□□□ -0.19
VAMP4-201ENST00000236192 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.19
VAMP4-201ENST00000236192 CNGA3Q16281 694 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 TRIM16LQ309B1 348 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 MAML1Q92585 1016 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 NDST4Q9H3R1 872 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 AMACRQ9UHK6 382 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 DCTN4Q9UJW0 460 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 CLPTM1O96005 669 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 PTDSS1P48651 473 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 LRRC8BQ6P9F7 803 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 IZUMO2Q6UXV1 221 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 LRRC74BQ6ZQY2 392 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 TMEM110Q86TL2 294 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 PALM2Q8IXS6 379 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 ACSBG1Q96GR2 724 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 HAUS7Q99871 368 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 SEPT3Q9UH03 358 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF180Q9UJW8 692 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 TMEM120BA0PK00 339 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF233A6NK53 670 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 UQCRFS1P1P0C7P4 283 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 GRIN1Q05586 938 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 TRIM50Q86XT4 487 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 HIPK4Q8NE63 616 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 MRPL46Q9H2W6 279 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
VAMP4-201ENST00000236192 DDX18Q9NVP1 670 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 PPARGC1AQ9UBK2 798 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 SAP30BPQ9UHR5 308 aaKnown RBP13.83□□□□□ -0.2
VAMP4-201ENST00000236192 RAP1GDS1P52306 607 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 ALOX15P16050 662 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 THOC7Q6I9Y2 204 aaKnown RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 NCAPG2Q86XI2 1143 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 WDR91A4D1P6 747 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 DNM1LO00429 736 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 SCG2P13521 617 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 PTGDRQ13258 359 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 MARK2Q7KZI7 788 aaKnown RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 WAPLQ7Z5K2 1190 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 ZNF184Q99676 751 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 SMIM31A0A1B0GVY4 71 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 GPAA1O43292 621 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 PTPN4P29074 926 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 CENPUQ71F23 418 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 EPSTI1Q96J88 318 aa13.82□□□□□ -0.2
VAMP4-201ENST00000236192 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
VAMP4-201ENST00000236192 KRT8P05787 483 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 HIC1Q14526 733 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 EEF2KMTQ96G04 330 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 NSL1Q96IY1 281 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 COQ7Q99807 217 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 EFHD1Q9BUP0 239 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 AIPL1Q9NZN9 384 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 WDR62O43379 1518 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 FOXO3O43524 673 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 MGEA5O60502 916 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 OCM2P0CE71 109 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 OCMP0CE72 109 aaPredicted RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 MRPS15P82914 257 aaKnown RBP13.81□□□□□ -0.2
VAMP4-201ENST00000236192 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
VAMP4-201ENST00000236192 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms