RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 A0A1W2PQC6 194 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 SPATA31C2B4DYI2 1134 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 ZNF507Q8TCN5 953 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 AKR1B15C9JRZ8 316 aaPredicted RBP16.47■□□□□ 0.23
CCDC47-201ENST00000225726 DNM2P50570 870 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 PSMC5P62195 406 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 CEP63Q96MT8 703 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
CCDC47-201ENST00000225726 ASTN1O14525 1302 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 POTEB2H3BUK9 544 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 ZNF131P52739 623 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 SMAP1Q8IYB5 467 aaPredicted RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 GTF3C2Q8WUA4 911 aaPredicted RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 PARVGQ9HBI0 331 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 ERCC3P19447 782 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 ICAM3P32942 547 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 CASP5P51878 434 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 MRPL44Q9H9J2 332 aaKnown RBP16.46■□□□□ 0.23
CCDC47-201ENST00000225726 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
CCDC47-201ENST00000225726 TPM1P09493 284 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 RBL2Q08999 1139 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 PANX2Q96RD6 677 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.22
CCDC47-201ENST00000225726 RRAGCQ9HB90 399 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 TXNRD2Q9NNW7 524 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 PCDHA10Q9Y5I2 948 aa16.46■□□□□ 0.22
CCDC47-201ENST00000225726 LRRC37A2A6NM11 1700 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 EIF3DO15371 548 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC47-201ENST00000225726 MYBP10242 640 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 UGCGQ16739 394 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 MYCT1Q8N699 235 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 B4DLN1 442 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 EDNRBP24530 442 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
CCDC47-201ENST00000225726 KNOP1Q1ED39 458 aaKnown RBP16.45■□□□□ 0.22
CCDC47-201ENST00000225726 MIIPQ5JXC2 388 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 TMEM139Q8IV31 216 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 UBE4BO95155 1302 aa16.45■□□□□ 0.22
CCDC47-201ENST00000225726 SOWAHBA6NEL2 793 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 RARRES1P49788 294 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 GBA2Q9HCG7 927 aaPredicted RBP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 MFAP3LO75121 409 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 GNA14O95837 355 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 CETPP11597 493 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 MAN2A1Q16706 1144 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 TIPINQ9BVW5 301 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 TRAF3IP3Q9Y228 551 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 DKC1O60832 514 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 HIP1RO75146 1068 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 GCNT3O95395 438 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 GYPCP04921 128 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 PSAPP07602 524 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 GTF2A2P52657 109 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
CCDC47-201ENST00000225726 WDR81Q562E7 1941 aa16.44■□□□□ 0.22
CCDC47-201ENST00000225726 PDXKO00764 312 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
CCDC47-201ENST00000225726 CCDC43Q96MW1 224 aaKnown RBP16.43■□□□□ 0.22
CCDC47-201ENST00000225726 MROH8Q9H579 483 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 SFI1A8K8P3 1242 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 STX10O60499 249 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
CCDC47-201ENST00000225726 MAPK7Q13164 816 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 Q3C1V9 767 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 FKBP15Q5T1M5 1219 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 STXBP4Q6ZWJ1 553 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 SHCBP1Q8NEM2 672 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 MPHOSPH6Q99547 160 aaKnown RBP16.43■□□□□ 0.22
CCDC47-201ENST00000225726 MYH11P35749 1972 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 ARHGAP6O43182 974 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 CASP14P31944 242 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 HOXD13P35453 343 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 TBC1D8BQ0IIM8 1120 aa16.43■□□□□ 0.22
CCDC47-201ENST00000225726 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
CCDC47-201ENST00000225726 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms