RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 AGAP11Q8TF27 550 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 FAM84BQ96KN1 310 aaPredicted RBP15.62■□□□□ 0.09
SFXN3-201ENST00000224807 PNMA5Q96PV4 448 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
SFXN3-201ENST00000224807 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 POTECB2RU33 542 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 UBOX5O94941 541 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 ECHS1P30084 290 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 FAM47EQ6ZV65 393 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 UNC13DQ70J99 1090 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 GLYCTKQ8IVS8 523 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 SH3RF3Q8TEJ3 882 aaPredicted RBP15.62■□□□□ 0.09
SFXN3-201ENST00000224807 FGFR1OP2Q9NVK5 253 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 BARHL2Q9NY43 387 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 AGAP1Q9UPQ3 857 aa15.62■□□□□ 0.09
SFXN3-201ENST00000224807 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 EME2A4GXA9 379 aaPredicted RBP15.61■□□□□ 0.09
SFXN3-201ENST00000224807 PDHA1P08559 390 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 CHRM1P11229 460 aaPredicted RBP15.61■□□□□ 0.09
SFXN3-201ENST00000224807 CREB1P16220 341 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 PLCG2P16885 1265 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 KCNJ1P48048 391 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 DENND2CQ68D51 928 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 GPBP1Q86WP2 473 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 RNF10Q8N5U6 811 aaKnown RBP15.61■□□□□ 0.09
SFXN3-201ENST00000224807 FBXO25Q8TCJ0 367 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 CUL5Q93034 780 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 TATDN2Q93075 761 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 NSUN4Q96CB9 384 aaKnown RBP15.61■□□□□ 0.09
SFXN3-201ENST00000224807 CEP72Q9P209 647 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 CCT8L1PA6NM43 557 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 SESN3P58005 492 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 PICALMQ13492 652 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 ERFEQ4G0M1 354 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 TMC3Q7Z5M5 1100 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 PNMA3Q9UL41 463 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 ANKRD36CQ5JPF3 1778 aa15.61■□□□□ 0.09
SFXN3-201ENST00000224807 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.61■□□□□ 0.09
SFXN3-201ENST00000224807 BAZ2AQ9UIF9 1905 aaKnown RBP15.6■□□□□ 0.09
SFXN3-201ENST00000224807 DRD4P21917 467 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 PABPC4Q13310 644 aaKnown RBP eCLIP15.6■□□□□ 0.09
SFXN3-201ENST00000224807 ASTE1Q2TB18 679 aaPredicted RBP15.6■□□□□ 0.09
SFXN3-201ENST00000224807 NUGGCQ68CJ6 796 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 CAPN12Q6ZSI9 719 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 PHLDB2Q86SQ0 1253 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 CCDC26Q8TAB7 109 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 KLHL29Q96CT2 875 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 SEMA4AQ9H3S1 761 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 USP17L5A8MUK1 530 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 F8VZ95 297 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 KIF1CO43896 1103 aaKnown RBP15.6■□□□□ 0.09
SFXN3-201ENST00000224807 CLSTN1O94985 981 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 MMP14P50281 582 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 LONRF1Q17RB8 773 aa15.6■□□□□ 0.09
SFXN3-201ENST00000224807 ZNF746Q6NUN9 644 aaPredicted RBP15.6■□□□□ 0.09
SFXN3-201ENST00000224807 IGF2BP3O00425 579 aaKnown RBP eCLIP15.59■□□□□ 0.09
SFXN3-201ENST00000224807 CDK17Q00537 523 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 ITIH3Q06033 890 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 FIGNQ5HY92 759 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 ELMO3Q96BJ8 720 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 FAXDC2Q96IV6 333 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.095e-7■■■■□ 19.8
SFXN3-201ENST00000224807 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 ZMYND12Q9H0C1 365 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 ERVK-5Q9HDB9 667 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 SLIT2O94813 1529 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 NUP98P52948 1817 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 H0YGN5 161 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 EVI5O60447 810 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 H2AFZP0C0S5 128 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 SLC8A1P32418 973 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 SNAP25P60880 206 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 SNX1Q13596 522 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 GRIK5Q16478 980 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 H2AFVQ71UI9 128 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 GUF1Q8N442 669 aaKnown RBP15.59■□□□□ 0.09
SFXN3-201ENST00000224807 CCT6BQ92526 530 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 C18orf8Q96DM3 657 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 HDAC9Q9UKV0 1011 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 NFS1Q9Y697 457 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 SSU72P8A0A1W2PR75 194 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 TAL1P17542 331 aaPredicted RBP15.59■□□□□ 0.09
SFXN3-201ENST00000224807 CASP4P49662 377 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 CASP5P51878 434 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 GNPTABQ3T906 1256 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 KRT25Q7Z3Z0 450 aa15.59■□□□□ 0.09
SFXN3-201ENST00000224807 AJAP1Q9UKB5 411 aaPredicted RBP15.59■□□□□ 0.09
SFXN3-201ENST00000224807 COL5A2P05997 1499 aaPredicted RBP15.58■□□□□ 0.09
SFXN3-201ENST00000224807 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 TCP11X1B4DZS4 312 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 PJA2O43164 708 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 DR1Q01658 176 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 KCNA1Q09470 495 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
SFXN3-201ENST00000224807 YTHDF3Q7Z739 585 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms