RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 GTF2IRD1Q9UHL9 959 aa26.5■■□□□ 1.83
HOMER3-201ENST00000221222 FBXO2Q9UK22 296 aaPredicted RBP26.5■■□□□ 1.83
HOMER3-201ENST00000221222 SRPRBQ9Y5M8 271 aaKnown RBP26.5■■□□□ 1.83
HOMER3-201ENST00000221222 STK24Q9Y6E0 443 aa26.5■■□□□ 1.83
HOMER3-201ENST00000221222 POTEB3A0JP26 581 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 SLITRK3O94933 977 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 TRIM60Q495X7 471 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 POTEBQ6S5H4 581 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 TNPO1Q92973 898 aaKnown RBP26.49■■□□□ 1.83
HOMER3-201ENST00000221222 LRCH3Q96II8 777 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 FAM167AQ96KS9 214 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 AK8Q96MA6 479 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 LXNQ9BS40 222 aa26.49■■□□□ 1.83
HOMER3-201ENST00000221222 A0A1W2PPC1 479 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 SPTLC2O15270 562 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 PPP6R2O75170 966 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 OATP04181 439 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 MARCKSP29966 332 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-201ENST00000221222 LONP1P36776 959 aaKnown RBP26.48■■□□□ 1.83
HOMER3-201ENST00000221222 RTP1P59025 263 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 KRT85P78386 507 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 PRKCEQ02156 737 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 FAM47CQ5HY64 1035 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 HAUS3Q68CZ6 603 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 FAM126BQ8IXS8 530 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 C4orf19Q8IY42 314 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 PPP1R13LQ8WUF5 828 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 BBXQ8WY36 941 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-201ENST00000221222 POLR3CQ9BUI4 534 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-201ENST00000221222 ZSWIM4Q9H7M6 989 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 TUFT1Q9NNX1 390 aa26.48■■□□□ 1.83
HOMER3-201ENST00000221222 WRAP73Q9P2S5 460 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-201ENST00000221222 NRCAMQ92823 1304 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 HBP1O60381 514 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 STBD1O95210 358 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 LYPLA2O95372 231 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 SPATA31C1P0DKV0 1188 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 RPA1P27694 616 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 CYP4A11Q02928 519 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 GRIN1Q05586 938 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 CKAP2LQ8IYA6 745 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 RCOR1Q9UKL0 485 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 TRPC6Q9Y210 931 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 COL1A2P08123 1366 aa26.47■■□□□ 1.83
HOMER3-201ENST00000221222 TRIP12Q14669 1992 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-201ENST00000221222 CD4P01730 458 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 MUTP22033 750 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 TLE2Q04725 743 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 PPFIA1Q13136 1202 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 CTTNQ14247 550 aaKnown RBP26.46■■□□□ 1.83
HOMER3-201ENST00000221222 XKR3Q5GH77 459 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 GDF6Q6KF10 455 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-201ENST00000221222 CATSPER3Q86XQ3 398 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 KRI1Q8N9T8 703 aaKnown RBP26.46■■□□□ 1.83
HOMER3-201ENST00000221222 KCNG4Q8TDN1 519 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 NRBP2Q9NSY0 501 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 ATP11BQ9Y2G3 1177 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 PP2D1A8MPX8 630 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 MED24O75448 989 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 INSRRP14616 1297 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 ADAM17P78536 824 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 HIC1Q14526 733 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 KRT79Q5XKE5 535 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 TPH2Q8IWU9 490 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 CHAMP1Q96JM3 812 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 SETD4Q9NVD3 440 aa26.46■■□□□ 1.83
HOMER3-201ENST00000221222 C17orf102A2RUQ5 167 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 RRN3P2A6NIE6 340 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 DCDC2CA8MYV0 355 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 B4GALT4O60513 344 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 PQBP1O60828 265 aaKnown RBP26.45■■□□□ 1.82
HOMER3-201ENST00000221222 GNAT1P11488 350 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 BMP8BP34820 402 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 GRIK4Q16099 956 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 SNX29Q8TEQ0 813 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 LMBR1Q8WVP7 490 aa26.45■■□□□ 1.82
HOMER3-201ENST00000221222 MMTAG2Q9BU76 263 aaKnown RBP26.45■■□□□ 1.82
HOMER3-201ENST00000221222 NIFKQ9BYG3 293 aaKnown RBP26.45■■□□□ 1.82
HOMER3-201ENST00000221222 TLR3O15455 904 aaKnown RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 NCLP19338 710 aaKnown RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 CDC25AP30304 524 aa26.44■■□□□ 1.82
HOMER3-201ENST00000221222 CCT6AP40227 531 aaKnown RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 MDM2Q00987 491 aaPredicted RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 ZNF484Q5JVG2 852 aa26.44■■□□□ 1.82
HOMER3-201ENST00000221222 CTAGE1Q96RT6 745 aa26.44■■□□□ 1.82
HOMER3-201ENST00000221222 UBE2OQ9C0C9 1292 aaKnown RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 CSRNP2Q9H175 543 aa26.44■■□□□ 1.82
HOMER3-201ENST00000221222 TRPV6Q9H1D0 765 aa26.44■■□□□ 1.82
HOMER3-201ENST00000221222 TRMT13Q9NUP7 481 aaKnown RBP26.44■■□□□ 1.82
HOMER3-201ENST00000221222 ARID2Q68CP9 1835 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 ZBTB42B2RXF5 422 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 SLC26A4O43511 780 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 PTGISQ16647 500 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 MARCH8Q5T0T0 291 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 ANO5Q75V66 913 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 LEO1Q8WVC0 666 aaPredicted RBP26.43■■□□□ 1.82
HOMER3-201ENST00000221222 CLIC6Q96NY7 704 aa26.43■■□□□ 1.82
HOMER3-201ENST00000221222 SCAND2PQ9GZW5 306 aaPredicted RBP26.43■■□□□ 1.82
HOMER3-201ENST00000221222 LOXHD1Q8IVV2 1947 aa26.42■■□□□ 1.82
HOMER3-201ENST00000221222 MBLAC1A4D2B0 266 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms