RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 CABIN1Q9Y6J0 2220 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ARFIP2P53365 341 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 KCNB1Q14721 858 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 MCUQ8NE86 351 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ALG13Q9NP73 1137 aaKnown RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 MYL7Q01449 175 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 PLOD1Q02809 727 aaPredicted RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 VIPAS39Q9H9C1 493 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 AP3B1O00203 1094 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 SEC24CP53992 1094 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 KCTD21Q4G0X4 260 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 LRRC8EQ6NSJ5 796 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 FAM81AQ8TBF8 368 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 PYGBP11216 843 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 TRIM8Q9BZR9 551 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 JAG2Q9Y219 1238 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 LCA5LO95447 670 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 ATP6V1G2O95670 118 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 COG4Q9H9E3 785 aa11.85□□□□□ -0.51
USP31-201ENST00000219689 TROQ12816 1431 aaPredicted RBP11.85□□□□□ -0.51
USP31-201ENST00000219689 HSPA4LO95757 839 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 HIC1Q14526 733 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 NCLNQ969V3 563 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 IQCB1Q15051 598 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 FOXR1Q6PIV2 292 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 RAB44Q7Z6P3 723 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 LRRC1Q9BTT6 524 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 L3MBTL1Q9Y468 752 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 A0A1B0GW55 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ARHGDIAP52565 204 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 LZICQ8WZA0 190 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 RTTNQ86VV8 2226 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 COPEO14579 308 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 LPXNO60711 386 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 FAM107AO95990 144 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 METTL14Q9HCE5 456 aaKnown RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 KRT17Q04695 432 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 MARK3P27448 753 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ATXN3P54252 364 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 SFSWAPQ12872 951 aaKnown RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 RUBCNQ92622 972 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ACADSP16219 412 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 ACAD11Q709F0 780 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 SKA2Q8WVK7 121 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 BRAFP15056 766 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 TAF12Q16514 161 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 BPIFA3Q9BQP9 254 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
USP31-201ENST00000219689 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 FOSL2P15408 326 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 PLIN5Q00G26 463 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 CENPUQ71F23 418 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 PARVBQ9HBI1 364 aa11.84□□□□□ -0.51
USP31-201ENST00000219689 CAPN9O14815 690 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
USP31-201ENST00000219689 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 UBN1Q9NPG3 1134 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 GINM1Q9NU53 330 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 DDX18Q9NVP1 670 aaKnown RBP11.83□□□□□ -0.52
USP31-201ENST00000219689 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 MTF1Q14872 753 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 EFTUD2Q15029 972 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■■■ 40.3
USP31-201ENST00000219689 GPR141Q7Z602 305 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 GORASP1Q9BQQ3 440 aa11.83□□□□□ -0.52
USP31-201ENST00000219689 GOLPH3LQ9H4A5 285 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms