RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PGRMC1O00264 195 aaKnown RBP20.42■□□□□ 0.86
SMPD3-201ENST00000219334 SCN4BQ8IWT1 228 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 MIPOL1Q8TD10 442 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 SFI1A8K8P3 1242 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 APBA1Q02410 837 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
SMPD3-201ENST00000219334 ZNF568Q3ZCX4 644 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 CCDC38Q502W7 563 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 RWDD4Q6NW29 188 aaKnown RBP20.42■□□□□ 0.86
SMPD3-201ENST00000219334 BEST2Q8NFU1 509 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 PMLP29590 882 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 SFNP31947 248 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 MSH2P43246 934 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 PHLDB3Q6NSJ2 640 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 KCNH4Q9UQ05 1017 aa20.42■□□□□ 0.86
SMPD3-201ENST00000219334 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 FAM20AQ96MK3 541 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 RASSF4Q9H2L5 321 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 NGRNQ9NPE2 291 aaKnown RBP20.41■□□□□ 0.86
SMPD3-201ENST00000219334 SCINQ9Y6U3 715 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 GNGT1P63211 74 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 PADI6Q6TGC4 694 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 TRIM42Q8IWZ5 723 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 SERPING1P05155 500 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 ZBED6P86452 979 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 ZBED1O96006 694 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 BANK1Q8NDB2 785 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 ENOX1Q8TC92 643 aaKnown RBP20.41■□□□□ 0.86
SMPD3-201ENST00000219334 C2orf40Q9H1Z8 148 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 NDST4Q9H3R1 872 aa20.41■□□□□ 0.86
SMPD3-201ENST00000219334 SART1O43290 800 aaKnown RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 STAT3P40763 770 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 NEK9Q8TD19 979 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 DCP1AQ9NPI6 582 aaPredicted RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 STK38LQ9Y2H1 464 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L15C9J2P7 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L13C9JLJ4 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L11C9JVI0 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L18D6R9N7 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L22D6RA61 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L17D6RBQ6 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L19D6RCP7 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L20D6RJB6 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 IGKV5-2P06315 115 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 SOX5P35711 763 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 IL9RQ01113 521 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L24Q0WX57 530 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 AIFM3Q96NN9 605 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 AXIN2Q9Y2T1 843 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 HECW2Q9P2P5 1572 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 A0A1B0GUA9 196 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 SNAP23O00161 211 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 CASP2P42575 452 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 CDO1Q16878 200 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 CEP95Q96GE4 821 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 PIDD1Q9HB75 910 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 F5H6K3 240 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 TNPO2O14787 897 aaKnown RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 KLRC3Q07444 240 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 CYP4F22Q6NT55 531 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 SLC35F6Q8N357 371 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 TDRD7Q8NHU6 1098 aaKnown RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 MTRQ99707 1265 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 HERC5Q9UII4 1024 aaKnown RBP20.4■□□□□ 0.86
SMPD3-201ENST00000219334 NFIXQ14938 502 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 TTC30AQ86WT1 665 aa20.4■□□□□ 0.86
SMPD3-201ENST00000219334 ASB14A6NK59 587 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 ATP1A2P50993 1020 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 LLGL1Q15334 1064 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 KSR1Q8IVT5 923 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 RAET1EQ8TD07 263 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 TNS3Q68CZ2 1445 aa20.39■□□□□ 0.86
SMPD3-201ENST00000219334 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.85
SMPD3-201ENST00000219334 PCGF5Q86SE9 256 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 CDC23Q9UJX2 597 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 JCADQ9P266 1359 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 ENC1O14682 589 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 TTC4O95801 387 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 TTC37Q6PGP7 1564 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 LRGUKQ96M69 825 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 PSMA2P25787 234 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 EPHA10Q5JZY3 1008 aa20.39■□□□□ 0.85
SMPD3-201ENST00000219334 SYNMO15061 1565 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 EIF4A3P38919 411 aaKnown RBP20.38■□□□□ 0.85
SMPD3-201ENST00000219334 PLTPP55058 493 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 GPT2Q8TD30 523 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 PBKQ96KB5 322 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 SPATA33Q96N06 139 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 GCOM2Q9BZD3 368 aaPredicted RBP20.38■□□□□ 0.85
SMPD3-201ENST00000219334 KCNQ2O43526 872 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 ZNF699Q32M78 642 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 LRRC31Q6UY01 552 aa20.38■□□□□ 0.85
SMPD3-201ENST00000219334 XXYLT1Q8NBI6 393 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms