RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 AFG3L2Q9Y4W6 797 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 DDX39AO00148 427 aaKnown RBP32.73■■■□□ 2.83
PABPN1-201ENST00000216727 EPHB6O15197 1021 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 MAP3K9P80192 1104 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 MYCT1Q8N699 235 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 TMOD4Q9NZQ9 345 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 KRT83P78385 493 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 KCNMA1Q12791 1236 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 ARHGEF16Q5VV41 709 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 ZNF662Q6ZS27 426 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 MAF1Q9H063 256 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 NHEJ1Q9H9Q4 299 aaPredicted RBP32.73■■■□□ 2.83
PABPN1-201ENST00000216727 PKD2L1Q9P0L9 805 aa32.73■■■□□ 2.83
PABPN1-201ENST00000216727 UBE4BO95155 1302 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 COL11A1P12107 1806 aaPredicted RBP32.72■■■□□ 2.83
PABPN1-201ENST00000216727 RRP9O43818 475 aaKnown RBP32.72■■■□□ 2.83
PABPN1-201ENST00000216727 ERCC3P19447 782 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 RPL13P26373 211 aaKnown RBP32.72■■■□□ 2.83
PABPN1-201ENST00000216727 SNRNP48Q6IEG0 339 aaKnown RBP32.72■■■□□ 2.83
PABPN1-201ENST00000216727 NEK11Q8NG66 645 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 BCAS3Q9H6U6 928 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 SPON1Q9HCB6 807 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 ASTN1O14525 1302 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 MYPNQ86TC9 1320 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 ARHGEF35A5YM69 484 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 LYPLA2O95372 231 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 PPP2R3AQ06190 1150 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 BAATQ14032 418 aaPredicted RBP32.72■■■□□ 2.83
PABPN1-201ENST00000216727 FIZ1Q96SL8 496 aa32.72■■■□□ 2.83
PABPN1-201ENST00000216727 SFI1A8K8P3 1242 aa32.71■■■□□ 2.83
PABPN1-201ENST00000216727 EIF3CLB5ME19 914 aaKnown RBP32.71■■■□□ 2.83
PABPN1-201ENST00000216727 NAA30Q147X3 362 aaPredicted RBP32.71■■■□□ 2.83
PABPN1-201ENST00000216727 NFIL3Q16649 462 aa32.71■■■□□ 2.83
PABPN1-201ENST00000216727 SH3D19Q5HYK7 790 aa32.71■■■□□ 2.83
PABPN1-201ENST00000216727 EIF3CQ99613 913 aaKnown RBP32.71■■■□□ 2.83
PABPN1-201ENST00000216727 DBR1Q9UK59 544 aaKnown RBP32.71■■■□□ 2.83
PABPN1-201ENST00000216727 SLC16A3O15427 465 aaKnown RBP32.7■■■□□ 2.83
PABPN1-201ENST00000216727 USP2O75604 605 aaPredicted RBP32.7■■■□□ 2.83
PABPN1-201ENST00000216727 MYCLP12524 364 aaPredicted RBP32.7■■■□□ 2.83
PABPN1-201ENST00000216727 SMCR8Q8TEV9 937 aaPredicted RBP32.7■■■□□ 2.83
PABPN1-201ENST00000216727 BAP1Q92560 729 aa32.7■■■□□ 2.83
PABPN1-201ENST00000216727 HAUS4Q9H6D7 363 aa32.7■■■□□ 2.83
PABPN1-201ENST00000216727 POLD4Q9HCU8 107 aa32.7■■■□□ 2.83
PABPN1-201ENST00000216727 STXBP4Q6ZWJ1 553 aa32.7■■■□□ 2.82
PABPN1-201ENST00000216727 VSIG10LQ86VR7 867 aa32.7■■■□□ 2.82
PABPN1-201ENST00000216727 CCDC155Q8N6L0 562 aa32.7■■■□□ 2.82
PABPN1-201ENST00000216727 ARMCX3Q9UH62 379 aaPredicted RBP32.7■■■□□ 2.82
PABPN1-201ENST00000216727 UTRNP46939 3433 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 NR3C1P04150 777 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 QARSP47897 775 aaKnown RBP32.69■■■□□ 2.82
PABPN1-201ENST00000216727 TMEM132BQ14DG7 1078 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 ZNF720Q7Z2F6 126 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 RBM46Q8TBY0 533 aaKnown RBP32.69■■■□□ 2.82
PABPN1-201ENST00000216727 TEX13BQ9BXU2 312 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 ADARB2Q9NS39 739 aaKnown RBP32.69■■■□□ 2.82
PABPN1-201ENST00000216727 HOXC10Q9NYD6 342 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 MRFAP1Q9Y605 127 aa32.69■■■□□ 2.82
PABPN1-201ENST00000216727 POLR2AP24928 1970 aaKnown RBP32.68■■■□□ 2.82
PABPN1-201ENST00000216727 HERVK_113P62684 666 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 ZNF569Q5MCW4 686 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 METTL14Q9HCE5 456 aaKnown RBP32.68■■■□□ 2.82
PABPN1-201ENST00000216727 CEP72Q9P209 647 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 TGFB1I1O43294 461 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 CCND2P30279 289 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 NMT1P30419 496 aaKnown RBP32.68■■■□□ 2.82
PABPN1-201ENST00000216727 FAM178BQ8IXR5 827 aa32.68■■■□□ 2.82
PABPN1-201ENST00000216727 NUCKS1Q9H1E3 243 aaKnown RBP32.68■■■□□ 2.82
PABPN1-201ENST00000216727 ZMYM2Q9UBW7 1377 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 IPO7O95373 1038 aaKnown RBP32.67■■■□□ 2.82
PABPN1-201ENST00000216727 JAK3P52333 1124 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 KCNA1Q09470 495 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 KCNH2Q12809 1159 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 PADI6Q6TGC4 694 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 PDCL3Q9H2J4 239 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 SAMM50Q9Y512 469 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 MAFGO15525 162 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 DDNO94850 711 aaPredicted RBP32.67■■■□□ 2.82
PABPN1-201ENST00000216727 ABL1P00519 1130 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 SFNP31947 248 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 KRT76Q01546 638 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 GPRASP2Q96D09 838 aa32.67■■■□□ 2.82
PABPN1-201ENST00000216727 PURBQ96QR8 312 aaKnown RBP32.67■■■□□ 2.82
PABPN1-201ENST00000216727 LRRC53A6NM62 1247 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 MAPK7Q13164 816 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 PDXDC1Q6P996 788 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 RRAGAQ7L523 313 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 CACNA2D4Q7Z3S7 1137 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 CCDC42Q96M95 316 aa32.66■■■□□ 2.82
PABPN1-201ENST00000216727 ATP9AO75110 1047 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 AKAP3O75969 853 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 NOL4O94818 638 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 NR3C2P08235 984 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 ODR4Q5SWX8 454 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.65■■■□□ 2.82
PABPN1-201ENST00000216727 NSUN6Q8TEA1 469 aaKnown RBP32.65■■■□□ 2.82
PABPN1-201ENST00000216727 SYN2Q92777 582 aaPredicted RBP32.65■■■□□ 2.82
PABPN1-201ENST00000216727 PCDHB13Q9Y5F0 798 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 SNCAIPQ9Y6H5 919 aa32.65■■■□□ 2.82
PABPN1-201ENST00000216727 SPDYE16A6NNV3 312 aaPredicted RBP32.65■■■□□ 2.82
PABPN1-201ENST00000216727 HIP1RO75146 1068 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms