RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 PAGR1Q9BTK6 254 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 TIPINQ9BVW5 301 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 ZSWIM5Q9P217 1185 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 ANGPTL3Q9Y5C1 460 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 INO80B-WBP1J3KQ70 363 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 SMARCA1P28370 1054 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 INPP1P49441 399 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 TEDDM1Q5T9Z0 273 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 FAM133AQ8N9E0 248 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 MAGEB5Q9BZ81 275 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 RPF1Q9H9Y2 349 aaKnown RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 SENP1Q9P0U3 644 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 FAF1Q9UNN5 650 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 SPDYE16A6NNV3 312 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 HGSO14964 777 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 TAF1BQ53T94 588 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 DARS2Q6PI48 645 aaKnown RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 SIX6OS1Q8N1H7 587 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 TCHHQ07283 1943 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 GNAT1P11488 350 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 NNTQ13423 1086 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 KRT31Q15323 416 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-201ENST00000157600 PYROXD1Q8WU10 500 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 USP17L3A6NCW0 530 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 USP17L4A6NCW7 530 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 AP3B1O00203 1094 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 LRRN2O75325 713 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 LIG3P49916 1009 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 USP17L1Q7RTZ2 530 aa13.49□□□□□ -0.25
LMCD1-201ENST00000157600 K7ERI5 159 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 DDIT3P35638 169 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 AP3M2P53677 418 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 TMEM60Q9H2L4 133 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 ABHD10Q9NUJ1 306 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 TMEM94Q12767 1356 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 XPAP23025 273 aaPredicted RBP13.48□□□□□ -0.25
LMCD1-201ENST00000157600 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
LMCD1-201ENST00000157600 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 AP1ARQ63HQ0 302 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 SPDL1Q96EA4 605 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 ART3Q13508 389 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
LMCD1-201ENST00000157600 OVOS2A0A0G2JMS6 1433 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 A0A1W2PQC6 194 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 KRT7P08729 469 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 ARL4CP56559 192 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 RCSD1Q6JBY9 416 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 ZBTB5O15062 677 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 IREB2P48200 963 aaKnown RBP13.48□□□□□ -0.25
LMCD1-201ENST00000157600 PFKFB3Q16875 520 aaPredicted RBP13.48□□□□□ -0.25
LMCD1-201ENST00000157600 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 METP08581 1390 aa13.48□□□□□ -0.25
LMCD1-201ENST00000157600 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PYGBP11216 843 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 LTKP29376 864 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 GRAPQ13588 217 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 DIXDC1Q155Q3 683 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 KCTD16Q68DU8 428 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 MB21D1Q8N884 522 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 TOPORSQ9NS56 1045 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 ZBED1O96006 694 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PSPC1Q8WXF1 523 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 CA4P22748 312 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PMLP29590 882 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 TOGARAM2Q6ZUX3 1019 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 DDX5P17844 614 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 SESN3P58005 492 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 WDR75Q8IWA0 830 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 ZNF772Q68DY9 489 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 SCG3Q8WXD2 468 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 SCNN1DP51172 638 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 FAM47CQ5HY64 1035 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PARD6BQ9BYG5 372 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 SOWAHDA6NJG2 315 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 IFNA8P32881 189 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 TFDP2Q14188 446 aa13.47□□□□□ -0.25
LMCD1-201ENST00000157600 SKA2Q8WVK7 121 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-201ENST00000157600 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms