RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ADCY1Q08828 1119 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 IFI16Q16666 785 aaKnown RBP21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 CETN3O15182 167 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 RGS16O15492 202 aaPredicted RBP21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 H2AFZP0C0S5 128 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 H2AFVQ71UI9 128 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 CLEC10AQ8IUN9 316 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 EMILIN3Q9NT22 766 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 NTSR2O95665 410 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 SLC51AQ86UW1 340 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 TPCN2Q8NHX9 752 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 EYA3Q99504 573 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 CCDC87Q9NVE4 849 aa21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 TRPM3Q9HCF6 1732 aaPredicted RBP21.87■■□□□ 1.09
PPP1R3F-201ENST00000055335 EMC10Q5UCC4 262 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 TEX11Q8IYF3 940 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 DAGLBQ8NCG7 672 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 TRIM6Q9C030 488 aaPredicted RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 PCDHB13Q9Y5F0 798 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 PALM3A6NDB9 673 aaPredicted RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 C21orf2O43822 256 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 UCHL3P15374 230 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 EXOC3L4Q17RC7 722 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 LRRC47Q8N1G4 583 aaKnown RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 EDEM3Q9BZQ6 932 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 CHORDC1Q9UHD1 332 aaPredicted RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 MEIS1O00470 390 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 CLIC2O15247 247 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 FLOT1O75955 427 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 DENND2CQ68D51 928 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 AADACL2Q6P093 401 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 PRCCQ92733 491 aaPredicted RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 CUL5Q93034 780 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 GPR101Q96P66 508 aaPredicted RBP21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 TMEM59LQ9UK28 342 aa21.86■■□□□ 1.09
PPP1R3F-201ENST00000055335 POTEB3A0JP26 581 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 POTECB2RU33 542 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 UBAP2Q5T6F2 1119 aaKnown RBP21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 LRCH2Q5VUJ6 765 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 POTEBQ6S5H4 581 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 MAEAQ7L5Y9 396 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 MICAL1Q8TDZ2 1067 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 TMOD4Q9NZQ9 345 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 DBR1Q9UK59 544 aaKnown RBP21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 PARP10Q53GL7 1025 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 AGBL2Q5U5Z8 902 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 TRIM59Q8IWR1 403 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 ABCF3Q9NUQ8 709 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 ARMCX3Q9UH62 379 aaPredicted RBP21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 GGA2Q9UJY4 613 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 PCDHA12Q9UN75 941 aa21.85■■□□□ 1.09
PPP1R3F-201ENST00000055335 GCKP35557 465 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 SEMA3FQ13275 785 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 SLC29A2Q14542 456 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 VPS36Q86VN1 386 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 CCDC65Q8IXS2 484 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 ACTRT1Q8TDG2 376 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 AMFRQ9UKV5 643 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 FGFR4P22455 802 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 MAP2K1Q02750 393 aaPredicted RBP21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 ZKSCAN8Q15776 578 aaPredicted RBP21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 MYBP10242 640 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 STAT3P40763 770 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 DR1Q01658 176 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 XRCC4Q13426 336 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.84■■□□□ 1.093e-6■■■■■ 260.8
PPP1R3F-201ENST00000055335 DAAM1Q9Y4D1 1078 aa21.84■■□□□ 1.09
PPP1R3F-201ENST00000055335 UPP2O95045 317 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 ANP32DO95626 131 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 ADCY7P51828 1080 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 KCNJ2P63252 427 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 HOOK3Q86VS8 718 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 GLYCTKQ8IVS8 523 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 ANKRD42Q8N9B4 389 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 PTPN22Q9Y2R2 807 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 IRF2BP2Q7Z5L9 587 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 PROM2Q8N271 834 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 FBXO25Q8TCJ0 367 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 SCFD1Q8WVM8 642 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 DNAJC19Q96DA6 116 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 SPDL1Q96EA4 605 aa21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 DDX25Q9UHL0 483 aaKnown RBP21.83■■□□□ 1.09
PPP1R3F-201ENST00000055335 PARP4Q9UKK3 1724 aaKnown RBP21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 DIAPH2O60879 1101 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 CAMTA2O94983 1202 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 LDHBP07195 334 aaKnown RBP21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 ERMARDQ5T6L9 678 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 RBM46Q8TBY0 533 aaKnown RBP21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 EPS8L3Q8TE67 593 aaKnown RBP21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 SYN2Q92777 582 aaPredicted RBP21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 CEP95Q96GE4 821 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 MTMR9Q96QG7 549 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 FAM129AQ9BZQ8 928 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 AIPL1Q9NZN9 384 aa21.83■■□□□ 1.08
PPP1R3F-201ENST00000055335 CASP5P51878 434 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms