RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ENTPD3O75355 529 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 ZC2HC1CQ53FD0 456 aaPredicted RBP14.43□□□□□ -0.1
CTNS-201ENST00000046640 CCDC181Q5TID7 509 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SFMBT2Q5VUG0 894 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 DYDC2Q96IM9 177 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 MS4A14Q96JA4 679 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SH2D3AQ9BRG2 576 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 SH2D4AQ9H788 454 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 ADAMTS1Q9UHI8 967 aa14.43□□□□□ -0.1
CTNS-201ENST00000046640 QSER1Q2KHR3 1735 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 GOLGA6CA6NDK9 693 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 GOLGA6DP0CG33 693 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 NMT1P30419 496 aaKnown RBP14.42□□□□□ -0.1
CTNS-201ENST00000046640 Q4G0T1 1027 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 TRIM59Q8IWR1 403 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 EHBP1Q8NDI1 1231 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 MBOAT7Q96N66 472 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 GOLGA6AQ9NYA3 693 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 VAV3Q9UKW4 847 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 RABGAP1Q9Y3P9 1069 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 TACC1O75410 805 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 CCT5P48643 541 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 SLC15A2Q16348 729 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 KCTD16Q68DU8 428 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
CTNS-201ENST00000046640 HDAC9Q9UKV0 1011 aa14.42□□□□□ -0.1
CTNS-201ENST00000046640 PACSIN2Q9UNF0 486 aaPredicted RBP14.42□□□□□ -0.1
CTNS-201ENST00000046640 TBCAO75347 108 aaKnown RBP14.41□□□□□ -0.1
CTNS-201ENST00000046640 FOSP01100 380 aaPredicted RBP14.41□□□□□ -0.1
CTNS-201ENST00000046640 TUBBP07437 444 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 HNRNPH3P31942 346 aaKnown RBP14.41□□□□□ -0.1
CTNS-201ENST00000046640 LRCH2Q5VUJ6 765 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 PACSIN1Q9BY11 444 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 HOMER2Q9NSB8 354 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 ZBTB21Q9ULJ3 1066 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 ESYT3A0FGR9 886 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 AKAP3O75969 853 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 CDK17Q00537 523 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 KNOP1Q1ED39 458 aaKnown RBP14.41□□□□□ -0.1
CTNS-201ENST00000046640 CCDC70Q6NSX1 233 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 RSBN1LQ6PCB5 846 aaPredicted RBP14.41□□□□□ -0.1
CTNS-201ENST00000046640 GJB7Q6PEY0 223 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 CREG2Q8IUH2 290 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 CPXCR1Q8N123 301 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 MYCT1Q8N699 235 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 FAM76AQ8TAV0 307 aa14.41□□□□□ -0.1
CTNS-201ENST00000046640 GREB1LQ9C091 1923 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 ARP10275 920 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 FKBP1AP62942 108 aaKnown RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 COG2Q14746 738 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 SLC9C1Q4G0N8 1177 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 TBC1D10BQ4KMP7 808 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 AGBL1Q96MI9 1066 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 PURBQ96QR8 312 aaKnown RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 ARMCX3Q9UH62 379 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 SAMM50Q9Y512 469 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 IGLV3-22A0A075B6J6 115 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 A0A087X0T9 212 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 FTCDO95954 541 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 FAM228BP0C875 321 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 MCM3P25205 808 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 RXRBP28702 533 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 KLHL30Q0D2K2 578 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 PACS2Q86VP3 889 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 TRIM58Q8NG06 486 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 IFT81Q8WYA0 676 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 FAM20AQ96MK3 541 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 CEP63Q96MT8 703 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 GOLPH3Q9H4A6 298 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 CEP72Q9P209 647 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 WRAP73Q9P2S5 460 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 SNX12Q9UMY4 172 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 ZSCAN5CA6NGD5 496 aaPredicted RBP14.4□□□□□ -0.1
CTNS-201ENST00000046640 SLITRK3O94933 977 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 RINT1Q6NUQ1 792 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 RDH13Q8NBN7 331 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 BANK1Q8NDB2 785 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 SPATA4Q8NEY3 305 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 TSGA10Q9BZW7 698 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 JRKLQ9Y4A0 524 aa14.4□□□□□ -0.1
CTNS-201ENST00000046640 ABCB11O95342 1321 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 GAS7O60861 476 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 OTOP1Q7RTM1 612 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 SH2D3CQ8N5H7 860 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
CTNS-201ENST00000046640 OSBPL9Q96SU4 736 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 TMX2Q9Y320 296 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 ATRNL1Q5VV63 1379 aa14.39□□□□□ -0.11
CTNS-201ENST00000046640 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms