RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MAN2A1Q16706 1144 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 OPA1O60313 960 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PSMC6P62333 389 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 GABPB1Q06547 395 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PAF1Q8N7H5 531 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 SOX10P56693 466 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 PANX2Q96RD6 677 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
CHPF2-201ENST00000035307 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
CHPF2-201ENST00000035307 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 EBAG9O00559 213 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 CYP2C8P10632 490 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 ZBED6P86452 979 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 DPYDQ12882 1025 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 KCNK9Q9NPC2 374 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 TNNI1P19237 187 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 LMBR1Q8WVP7 490 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 AK8Q96MA6 479 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 PPANQ9NQ55 473 aaKnown RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 ADCY1Q08828 1119 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
CHPF2-201ENST00000035307 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 LXNQ9BS40 222 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 GOLPH3Q9H4A6 298 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
CHPF2-201ENST00000035307 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 KRIT1O00522 736 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 RGL2O15211 777 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GYPCP04921 128 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 BRD3Q15059 726 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 BTAF1O14981 1849 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 ATP1A1P05023 1023 aaKnown RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GABPAQ06546 454 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 CEP85LQ5SZL2 805 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GBP6Q6ZN66 633 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 CPLX4Q7Z7G2 160 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 NAP1L4Q99733 375 aaKnown RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 GCFC2P16383 781 aaKnown RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.3
CHPF2-201ENST00000035307 FAM49AQ9H0Q0 323 aaPredicted RBP13.15□□□□□ -0.3
CHPF2-201ENST00000035307 SLC16A4O15374 487 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
CHPF2-201ENST00000035307 H2AFZP0C0S5 128 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 MNAT1P51948 309 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 HUNKP57058 714 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 MESDQ14696 234 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 IL17AQ16552 155 aa13.14□□□□□ -0.31
CHPF2-201ENST00000035307 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms