RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Pkn1P70268 946 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Psmd1Q3TXS7 953 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ppp1r12cQ3UMT1 782 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Gm5169Q5M8P2 212 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Tsg101Q61187 391 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Myo6Q64331 1265 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ccp110Q7TSH4 1004 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ccdc172Q810N9 267 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Grin3bQ91ZU9 1003 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Krt82Q99M74 516 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Lrrc57Q9D1G5 239 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Snrnp35Q9D384 244 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Dydc1Q9D9T0 175 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mrpl12Q9DB15 201 aaKnown RBP11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 CsadQ9DBE0 493 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 CorinQ9Z319 1113 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Dock5B2RY04 1868 aa11.21□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Rbbp6P97868 1790 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Akap11E9Q777 1895 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Apol7aB2RT54 418 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Abl1P00520 1123 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Gap43P06837 227 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Lig1P37913 916 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Hsd17b1P51656 344 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Gjb6P70689 261 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 GclcP97494 637 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Nhej1Q3KNJ2 295 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Pla2g4eQ50L42 875 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Cyfip2Q5SQX6 1253 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Fbxw10Q5SUS0 1030 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Rhpn1Q61085 643 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ccna1Q61456 421 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mapk6Q61532 720 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mcm7Q61881 719 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Pick1Q62083 416 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ddx42Q810A7 929 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Tarsl2Q8BLY2 790 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 DlatQ8BMF4 642 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Scfd2Q8BTY8 684 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 E330017A01RikQ8BU47 192 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Nup58Q8R332 587 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Klhl20Q8VCK5 604 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Krt79Q8VED5 531 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Snx11Q91WL6 271 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Chchd3Q9CRB9 227 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Dtwd2Q9D0U1 298 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Wdr64Q9D565 1086 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Rwdd2aQ9D9S3 292 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ercc4Q9QZD4 917 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Clip2Q9Z0H8 1047 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Tjp2Q9Z0U1 1167 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Cog1Q9Z160 980 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Hdac6Q9Z2V5 1149 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Flt1P35969 1333 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Zfyve9A2A8R0 1397 aa11.2□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Gm15262A0A140LIQ5 728 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Slc39a2G3X943 309 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sec24cG3X972 1096 aaKnown RBP11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Trappc3O55013 180 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mx1P09922 631 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sept2P42208 361 aaKnown RBP11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Shox2P70390 331 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 1700013D24RikQ0P521 120 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sec31aQ3UPL0 1230 aaKnown RBP11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Krt74Q6IFZ9 495 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Als2cr12Q8BVM7 383 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Usp38Q8BW70 1042 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Kbtbd4Q8R179 534 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 ApobrQ8VBT6 942 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Trim34aQ99PP6 485 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Upk3bl1Q9D701 249 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Rapgef4Q9EQZ6 1011 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Git2Q9JLQ2 708 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Prl2c5Q9JLV9 222 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Nr2e3Q9QXZ7 395 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Mtmr9Q9Z2D0 545 aa11.19□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Bnip3O55003 187 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Prl2c3P04768 224 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 CatspereP0DP43 985 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Nf2P46662 596 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Specc1Q5SXY1 1067 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Sh3gl1Q62419 368 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Dcaf5Q80T85 946 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ttll4Q80UG8 1193 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Armcx3Q8BHS6 379 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Rnf219Q8K2Y0 722 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Dusp19Q8K4T5 220 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Amhr2Q8K592 568 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Vps37cQ8R105 352 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Trub2Q91WG3 331 aaKnown RBP11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Prmt3Q922H1 532 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Eps8l2Q99K30 729 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 3830403N18RikQ9D6C3 208 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Phf2Q9WTU0 1096 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 RfxankQ9Z205 269 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Gm4985A2ALC6 410 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Ccdc24E9PUW8 296 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Kif5cP28738 956 aaKnown RBP11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 PRAG1Q571I4 1179 aa11.18□□□□□ -0.62
Pdlim5-204ENSMUST00000168967 Asap3Q5U464 904 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms