RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Zrsr1Q64707 428 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 RubcnQ80U62 956 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ehd2Q8BH64 543 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Zfp449Q8CB76 518 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mknk2Q8CDB0 459 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Atxn7Q8R4I1 867 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Magi2Q9WVQ1 1275 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mmrn1B2RPV6 1210 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Dynlt1P51807 113 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Nuak1Q641K5 658 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Myo6Q64331 1265 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ppm1mQ8BU27 406 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 B3galt4Q9Z0F0 371 aa17.25■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Map3k7Q62073 579 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Sec23ipQ6NZC7 998 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ccdc15Q8C9M2 810 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Srgap2Q91Z67 1071 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mrpl11Q9CQF0 192 aaKnown RBP17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gad1P48318 593 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gprin1Q3UNH4 932 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Stkld1Q80YS9 662 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gprasp2Q8BUY8 826 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ints4Q8CIM8 964 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Abt1Q9QYL7 269 aaKnown RBP17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Nkx1-1G3UXB3 402 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Sesn2P58043 480 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Slc9c1Q6UJY2 1175 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 CpzQ8R4V4 654 aa17.24■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Acbd5Q5XG73 508 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 GartQ64737 1010 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 GakQ99KY4 1305 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Apol7bB1AQP7 369 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Telo2Q9DC40 840 aaKnown RBP17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Nim1kQ8BHI9 436 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 SowahdQ8BY98 327 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cep85lA0A1W2P884 806 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Exoc7O35250 697 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cyp11b2P15539 500 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Irf5P56477 497 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Vmn1r209Q5NC97 312 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Haus4Q8BFT2 363 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mfap3lQ9D3X9 409 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 MajinQ9D992 256 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 PycardQ9EPB4 193 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Stk11Q9WTK7 436 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Setd1bQ8CFT2 1985 aa17.23■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 LtkP08923 888 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Trim71Q1PSW8 855 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cage1Q5IR70 849 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Snx14Q8BHY8 964 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Iqcb1Q8BP00 598 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Spats2lQ91WJ7 558 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ap1g2O88512 791 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Fgl2P12804 432 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Zbtb17Q60821 794 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Nlrp4fQ66X05 959 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Skida1Q80YR3 822 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Phf20Q8BLG0 1010 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ttc1Q91Z38 292 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Rmdn1Q9DCV4 305 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 VdrP48281 422 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pald1P70261 859 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Kiaa1468Q148V7 1216 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Kcnq3Q8K3F6 873 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Catsper1Q91ZR5 686 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Mrps9Q9D7N3 390 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Npy5rO70342 466 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ric8aQ3TIR3 530 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ccdc51Q3URS9 406 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pabpc4Q6PHQ9 660 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Atxn2lQ7TQH0 1049 aaKnown RBP17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ckap2lQ7TS74 745 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Wdr27Q8C5V5 780 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pcdhb12Q91Y07 789 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 4931423N10RikQ9D4J9 382 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 4933406M09RikG3XA12 479 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gja3Q64448 417 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 6820408C15RikQ8BJX2 354 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Phf23Q8BSN5 401 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Elp3Q9CZX0 547 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ecel1Q9JMI0 775 aa17.22■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Actn1Q7TPR4 892 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Atp10bB1AWN4 1474 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Tnip3A0A1D5RMN0 279 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 HunkO88866 714 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Cyth2P63034 400 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Asap3Q5U464 904 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Usp8Q80U87 1080 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Acad11Q80XL6 779 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Q8CEZ4 452 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Arhgap29Q8CGF1 1266 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Thoc1Q8R3N6 657 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 GfapP03995 430 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Atp8b1Q148W0 1251 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Nab2Q61127 525 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Ppp1r14cQ8R4S0 164 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Pdia6Q922R8 440 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Psma8Q9CWH6 250 aa17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Xrn1P97789 1719 aaKnown RBP17.21■□□□□ 0.35
Pcdh1-203ENSMUST00000160721 Gm21962L7N280 338 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms