RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 NapgQ9CWZ7 312 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 PdclQ9DBX2 301 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 PycardQ9EPB4 193 aa17.47■□□□□ 0.39
Trim39-203ENSMUST00000113706 PhipQ8VDD9 1821 aaKnown RBP17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Got1P05201 413 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Etv6P97360 485 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Kcnma1Q08460 1209 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 WhrnQ80VW5 918 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 AW822073A0A0N4SUK1 652 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ttll10A4Q9F3 704 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cetn3O35648 167 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cep126Q0VBV7 1103 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 P4ha1Q60715 534 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 IgflQ6B9Z0 140 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Haus4Q8BFT2 363 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Chtf18Q8BIW9 969 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dclk3Q8BWQ5 790 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dbndd2Q9CRD4 158 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Rwdd2aQ9D9S3 292 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Extl3Q9WVL6 918 aa17.46■□□□□ 0.39
Trim39-203ENSMUST00000113706 Otud7bB2RUR8 840 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pik3r1P26450 724 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tbc1d22bQ80VE5 505 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pank4Q80YV4 820 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Btnl9Q8BJE2 536 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Smc1bQ920F6 1248 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pgap3A2A559 320 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Slc16a2O70324 545 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 UgcgO88693 394 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Carmil2Q3V3V9 1296 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Znf354cQ571J5 560 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tlr13Q6R5N8 991 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pym1Q8CHP5 203 aaKnown RBP17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 OtoaQ8K561 1137 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Sgms1Q8VCQ6 419 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 FignQ9ERZ6 759 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Slc12a7Q9WVL3 1083 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 P4hbP09103 509 aaKnown RBP17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Shc3Q61120 474 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cct6bQ61390 531 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Recql4Q75NR7 1216 aaKnown RBP17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cog5Q8C0L8 829 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ulbp1Q8HWA3 334 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pcdhb12Q91Y07 789 aa17.45■□□□□ 0.38
Trim39-203ENSMUST00000113706 Hnrnph3D3Z3N4 346 aaKnown RBP17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cct6aP80317 531 aaKnown RBP17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Arl14Q3SXC5 192 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tmem232Q5K6N0 675 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ddx10Q80Y44 875 aaKnown RBP17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Plagl2Q925T4 496 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cdca7Q9D0M2 382 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Dicer1Q8R418 1916 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Klhdc7aA2APT9 773 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Magea1O89006 320 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Magea5O89009 320 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Fam83hQ148V8 1209 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 PodnQ7TQ62 611 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Slc14a1Q8VHL0 384 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Magea2Q9R2A2 320 aa17.44■□□□□ 0.38
Trim39-203ENSMUST00000113706 Gm45194A0A140LJG2 572 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Eif3dO70194 548 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Men1O88559 611 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Hoxc10P31257 342 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Vgll3P85442 326 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Zc3h18Q0P678 948 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 SlmapQ3URD3 845 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 MaeaQ4VC33 396 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Mettl25Q6NXH8 597 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Wdr3Q8BHB4 942 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cdk17Q8K0D0 523 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Eif3cQ8R1B4 911 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 MicalclQ9D5U9 680 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Pappa2E9PZ87 1789 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tll1Q62381 1013 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Antxr2Q6DFX2 487 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 TxlnaQ6PAM1 554 aaKnown RBP17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ccdc96Q9CR92 584 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Galnt15Q9D2N8 638 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cntn6Q9JMB8 1028 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 AunipE9Q6Z5 340 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Rbm46P86049 533 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Tmtc1Q3UV71 942 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Msantd2Q6NZR2 559 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Fbxo2Q80UW2 297 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Lca5lQ8C0X0 741 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ppp1r3aQ99MR9 1089 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Dnajc18Q9CZJ9 357 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Stk32bQ9JJX8 414 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Atp1a4Q9WV27 1032 aa17.43■□□□□ 0.38
Trim39-203ENSMUST00000113706 Plcg1Q62077 1302 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Cntnap2Q9CPW0 1332 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Lrrc4bP0C192 709 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Adamts10P58459 1104 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Gm5169Q5M8P2 212 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Klra17Q9JMA4 273 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Gcnt4E9Q649 455 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 SfnO70456 248 aaKnown RBP17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Ogfod1Q3U0K8 545 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Kiaa1211Q5PR69 1207 aa17.42■□□□□ 0.38
Trim39-203ENSMUST00000113706 Mrgprx1Q8CIP3 322 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms