RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Raph1F2Z3U3 1266 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nr2f2P43135 414 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Fam207aP58468 219 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Flot2Q60634 428 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 FntaQ61239 377 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gpbp1l1Q6NZP2 473 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Hat1Q8BY71 416 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gpsm2Q8VDU0 679 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 RestQ8VIG1 1082 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Pcdha3Q91Y16 942 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ugp2Q91ZJ5 508 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Cttnbp2nlQ99LJ0 638 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Dnaaf1Q9D2H9 634 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Carmil3Q3UFQ8 1375 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm28042B7ZCM9 1014 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Cdh18E9Q9Q6 790 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Myo1aO88329 1043 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Pla2g4bP0C871 782 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Sem1P60897 70 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 InscQ3HNM7 579 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ushbp1Q8R370 680 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 CatsperzQ9CQP8 194 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Galnt15Q9D2N8 638 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Slxl1Q9D515 155 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Cmtm5Q9D6G9 156 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Psmd14O35593 310 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Surf6P70279 355 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Tbx1P70323 479 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Pcgf5Q3UK78 256 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Q8BWQ6 963 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Terb1Q8C0V1 768 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nckap1lQ8K1X4 1134 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Mccc1Q99MR8 717 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Khdc3Q9CWU5 440 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Zkscan5Q9Z1D8 819 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm7535F7CXE4 302 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Krt10P02535 570 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Mybl1P51960 751 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Abce1P61222 599 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Crnkl1P63154 690 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Tmed1Q3V009 227 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nim1kQ8BHI9 436 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ccdc17Q8CE13 565 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Xpo6Q924Z6 1125 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Rnaseh2aQ9CWY8 301 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ndufa8Q9DCJ5 172 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Dmap1Q9JI44 468 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Dnajc12Q9R022 198 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Hsd17b4P51660 735 aaKnown RBP6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Atp1b3P97370 278 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 LrmpQ60664 539 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nlrp4eQ66X19 978 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Morc2bQ8C5W4 1022 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Kbtbd13Q8C828 458 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Slain2Q8CI08 581 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 FliiQ9JJ28 1271 aa6.93□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Mbd5B1AYB6 1498 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Rsbn1lD3Z0K6 821 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 D830030K20RikE9PYQ5 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm3043K7N693 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm16440K7N6G6 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm2244L7N2A3 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm3278L7N2D2 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm8271L7N2E2 218 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Casp14O89094 257 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ece1Q4PZA2 769 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Gm13103Q4VAD2 491 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Sh3gl3Q62421 347 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Krt39Q6IFX4 482 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Clic6Q8BHB9 596 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Utp6Q8VCY6 597 aaKnown RBP6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Chd1lQ9CXF7 900 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Trpc4Q9QUQ5 974 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ddx49Q4FZF3 480 aaKnown RBP6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Slc27a1Q60714 646 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Vav2Q60992 868 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Tshz3Q8CGV9 1081 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Tor1aip1Q921T2 595 aaKnown RBP6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Cep72Q9D3R3 646 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Cep85lA0A1W2P884 806 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Pcsk1P63239 753 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Akap14Q3V0I7 536 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Szrd1Q6NXN1 152 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Tmem179Q8BHH9 233 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nlrp4aQ8BU40 982 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Pnma3Q8JZW8 466 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Zbed6D2EAC2 980 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Nfe2Q07279 373 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Rnf207Q3V3A7 635 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Krt73Q6NXH9 539 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Zbtb40Q6PCS8 1258 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Klhl7Q8BUL5 586 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Q8BZJ8 459 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Irak4Q8R4K2 459 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 CpvlQ9D3S9 478 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Ddx25Q9QY15 484 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Akap17bA2A3V1 959 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Vti1bO88384 232 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 TpbpaP13438 124 aa6.92□□□□□ -1.3
Trp53bp1-201ENSMUST00000110647 Dnajc6Q80TZ3 938 aa6.92□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms