RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Spata2Q8K004 515 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 P3h4Q8K2B0 443 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Klhl20Q8VCK5 604 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ddah1Q9CWS0 285 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rnaseh1O70338 285 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Gdf10P97737 476 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Clul1Q3ZRW6 464 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Slain1Q68FF7 579 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Arhgef19Q8BWA8 802 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Cog5Q8C0L8 829 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Krtap5-3Q9D226 196 aa20.04■□□□□ 0.8
Trim47-202ENSMUST00000106441 Il27raO70394 623 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 OatP29758 439 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Sh2d1b2Q45HK4 132 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Stxbp3Q60770 592 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Dock2Q8C3J5 1828 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Plcg2Q8CIH5 1265 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Saal1Q9D2C2 474 aa20.03■□□□□ 0.8
Trim47-202ENSMUST00000106441 Pus7B7ZNL8 666 aaKnown RBP20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Lrrc32G3XA59 663 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Serpinb2P12388 415 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Epb41l4aP52963 686 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rbm46P86049 533 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Kcnma1Q08460 1209 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Vmn1r209Q5NC97 312 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Micall1Q8BGT6 870 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Rufy1Q8BIJ7 712 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Bri3bpQ8BXV2 253 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Galntl5Q9D4M9 431 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 SetQ9EQU5 289 aaKnown RBP20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 CenphQ9QYM8 241 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 ArcQ9WV31 396 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Dicer1Q8R418 1916 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 E9QMW4 1145 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Cbx2P30658 519 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Irx1P81068 480 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Nlrx1Q3TL44 975 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Ift20Q61025 132 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Slc13a4Q8BZ82 625 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Usp27Q8CEG8 438 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 GzmnQ920S1 248 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Kremen1Q99N43 473 aa20.02■□□□□ 0.8
Trim47-202ENSMUST00000106441 Arrdc4A0A0B4J1F4 415 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Apol10bG3X9K7 334 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Fgd3O88842 733 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 LdhbP16125 334 aaKnown RBP20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tph1P17532 447 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Fam107bQ3TGF2 131 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 SlmapQ3URD3 845 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gngt1Q61012 74 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 EregQ61521 162 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Sh3gl1Q62419 368 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ncapg2Q6DFV1 1138 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Rexo1Q7TT28 1213 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Erlin2Q8BFZ9 340 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 F13a1Q8BH61 732 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Matr3Q8K310 846 aaKnown RBP20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Tesk2Q8VCT9 570 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Otud7bB2RUR8 840 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Setd4P58467 439 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Mapk6Q61532 720 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 BC048507Q80ZS7 89 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 MyripQ8K3I4 856 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Usp33Q8R5K2 909 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 Lrrc57Q9D1G5 239 aa20.01■□□□□ 0.79
Trim47-202ENSMUST00000106441 ErmardE9Q048 622 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 XlrP05531 208 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 OsbpQ3B7Z2 805 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 PnocQ64387 187 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gja3Q64448 417 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Nap1l4Q78ZA7 375 aaKnown RBP20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Vgll2Q8BGW8 322 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Fbxo28Q8BIG4 368 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Armc6Q8BNU0 468 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 AopepQ8BXQ6 817 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gpcpd1Q8C0L9 675 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Lrrc41Q8K1C9 807 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Kif17Q99PW8 1038 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Vta1Q9CR26 309 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Klc4Q9DBS5 619 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 HunkO88866 714 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Atoh1P48985 351 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Gjb6P70689 261 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Pls1Q3V0K9 630 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Naa15Q80UM3 865 aaKnown RBP20■□□□□ 0.79
Trim47-202ENSMUST00000106441 BlmhQ8R016 455 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Nxnl2Q9D531 156 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Spata17Q9D552 379 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Ccdc89Q9DA73 370 aa20■□□□□ 0.79
Trim47-202ENSMUST00000106441 Men1O88559 611 aaKnown RBP19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Mcl1P97287 331 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Znf827Q505G8 1078 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Atp13a3Q5XF89 1219 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 PigsQ6PD26 555 aaKnown RBP19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Spag7Q7TNE3 227 aaKnown RBP19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Bbs9Q811G0 885 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 3830417A13RikQ8BQJ2 303 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Dnajc17Q91WT4 303 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 1700020D05RikQ99PB1 294 aa19.99■□□□□ 0.79
Trim47-202ENSMUST00000106441 Sertad1Q9JL10 236 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms