RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ddx10Q80Y44 875 aaKnown RBP16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ccdc50Q810U5 305 aaKnown RBP16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Thap3Q8BJ25 218 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Lmbrd1Q8K0B2 537 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Q91Z58 1206 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Sertad1Q9JL10 236 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Znf394Q9Z1D9 521 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Slfn14V9GXG1 899 aa16.1■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Vmn2r79E9Q067 851 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Sept2P42208 361 aaKnown RBP16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Klrb1Q0ZUP1 214 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 SpertQ32MG2 446 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Muc3aQ3U5A2 218 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Naif1Q6PFD7 327 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ccdc25Q78PG9 208 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ccdc15Q8C9M2 810 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 NptxrQ99J85 493 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pdxdc1Q99K01 787 aaKnown RBP16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Slc26a4Q9R155 780 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rbbp6P97868 1790 aaKnown RBP16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gm14525B1AZA0 212 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gm2012B1B0R1 212 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Flt1P35969 1333 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Traf5P70191 558 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rbm46P86049 533 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cul4aQ3TCH7 759 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Esyt2Q3TZZ7 845 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Zc3h12cQ5DTV4 884 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gm14819Q62478 212 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Grm4Q68EF4 912 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Stkld1Q80YS9 662 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Rnaseh2bQ80ZV0 308 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 DcakdQ8BHC4 231 aaKnown RBP16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Agap1Q8BXK8 857 aaKnown RBP16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ppp1r3aQ99MR9 1089 aa16.09■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 FscbA1EGX6 1074 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ttc38A3KMP2 465 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cetn3O35648 167 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Tagap1P0CAX8 505 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pfkfb2P70265 519 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Fgfr1opQ66JX5 399 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Pip5kl1Q6U7H8 395 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ece2Q80Z60 881 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Tbx22Q8K402 517 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Cacnb1Q8R3Z5 597 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Kctd10Q922M3 315 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Ddah1Q9CWS0 285 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Gtf2h1Q9DBA9 547 aa16.08■□□□□ 0.17
Ushbp1-201ENSMUST00000049184 Scn4aQ9ER60 1841 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Fbf1A2A870 1173 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Apol10bG3X9K7 334 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Kcnu1O54982 1121 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Sstr3P30935 428 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Wfs1P56695 890 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Znf367Q0VDT2 340 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Syne3Q4FZC9 975 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 CcnjlQ5SRT8 387 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 StilQ60988 1262 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Oca2Q62052 833 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Herc4Q6PAV2 1057 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 AdalQ80SY6 360 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Abcf3Q8K268 709 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 OtoaQ8K561 1137 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Golga1Q9CW79 758 aa16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 RnmtQ9D0L8 465 aaKnown RBP16.08■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Brwd3A2AHJ4 1799 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Gm30191A0A0U1RNT7 187 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Mmrn1B2RPV6 1210 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 PtenO08586 403 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Cpsf2O35218 782 aaKnown RBP16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Copb2O55029 905 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Oprl1P35377 367 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Pon1P52430 355 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ndufaf2Q59J78 168 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Krt14Q61781 484 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Hdac10Q6P3E7 666 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Cdan1Q8CC12 1239 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Lgr5Q9Z1P4 907 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Bub1bQ9Z1S0 1052 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Plekhg2Q6KAU7 1340 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Kcnh4A2A5F7 1018 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Nup62clA2AG10 272 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Pdk4O70571 412 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Orc4O88708 433 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Tal1P22091 329 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Alppl2P24823 529 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Nr2f2P43135 414 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Rapgef1Q3UHC1 1224 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Lrrc36Q3V0M2 755 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Dhx37Q6NZL1 1150 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 AgpsQ8C0I1 645 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Myl6bQ8CI43 207 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Cdk9Q99J95 372 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Bzw1Q9CQC6 419 aaKnown RBP16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ssr1Q9CY50 286 aaKnown RBP16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Ftsj3Q9DBE9 838 aaKnown RBP16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 PlekQ9JHK5 350 aaKnown RBP16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Tacc3Q9JJ11 631 aa16.07■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Spocd1B1ASB6 936 aa16.06■□□□□ 0.16
Ushbp1-201ENSMUST00000049184 Itga9B8JK39 1036 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms