RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rmdn1Q9DCV4 305 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rnf123Q5XPI3 1314 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cntnap1O54991 1385 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 ErmardE9Q048 622 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Myl1P05977 188 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gucy2cQ3UWA6 1072 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sorbs1Q62417 1290 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cdc23Q8BGZ4 597 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Cfap36Q8C6E0 343 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Krt222Q8CCX5 294 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Olfr397Q8VEZ6 315 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Serpina16D3Z660 418 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sec23aQ01405 765 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Frmd8Q3UFK8 466 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Lrch2Q3UMG5 773 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Trappc3lQ4KL14 181 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Znf12Q7TSI0 686 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Upb1Q8VC97 393 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Rbm31yQ9D3U4 565 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Tjp3Q9QXY1 905 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Gadd45gQ9Z111 159 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Lgr5Q9Z1P4 907 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Grin2dQ03391 1323 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Herc3A6H6S0 1050 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Nmt1O70310 496 aaKnown RBP12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Birc2Q62210 612 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Snapc2Q91XA5 359 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Atp6v1e2Q9D593 226 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Psmd10Q9Z2X2 231 aa12.84□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Sipa1l2Q80TE4 1722 aa12.83□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Olfr552E9Q545 317 aa12.83□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Dars2Q8BIP0 653 aa12.83□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Trim9Q8C7M3 817 aa12.83□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Add1Q9QYC0 735 aaKnown RBP12.83□□□□□ -0.35
Pcif1-201ENSMUST00000041643 Zmym2Q9CU65 1376 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fbxl16A2RT62 479 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Carmil2Q3V3V9 1296 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Akap7Q7TN79 314 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ush1gQ80T11 461 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cwf19l2Q8BG79 887 aaKnown RBP12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rassf4Q8CB96 322 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fermt3Q8K1B8 665 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Arl8aQ8VEH3 186 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 1700129C05RikQ9CQ77 218 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ifi35Q9D8C4 286 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tnni1Q9WUZ5 187 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tubgcp6G5E8P0 1769 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Mcl1P97287 331 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nsun7Q14AW5 724 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ppp2r5eQ61151 467 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Nim1kQ8BHI9 436 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ifi202Q9R002 445 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Scn4aQ9ER60 1841 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Aoc3O70423 765 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Clca4aQ6Q473 924 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ipo5Q8BKC5 1097 aaKnown RBP12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Q8K2W9 541 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Etnk1Q9D4V0 363 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Riok3Q9DBU3 519 aaKnown RBP12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Olfr67F8VPJ8 320 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ugt1a6bK9J7B2 531 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 VimP20152 466 aaKnown RBP12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Zfp90Q61967 636 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ugt1a6Q64435 531 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Panx2Q6IMP4 677 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Usp49Q6P9L4 685 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Ugt1a7cQ6ZQM8 531 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Q8C5C9 218 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Zcchc8Q9CYA6 709 aaKnown RBP12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Extl2Q9ES89 330 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Actn2Q9JI91 894 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Angptl3Q9R182 455 aa12.83□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Map2P20357 1828 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Arpp19P56212 112 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 UrgcpQ5NCI0 926 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm11437Q5QR91 290 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Fbxo28Q8BIG4 368 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cplx3Q8R1B5 158 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atp2a1Q8R429 994 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tdrd1Q99MV1 1172 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Paip2Q9D6V8 124 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gm36210A0A1B0GS00 229 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cbfa2t2O70374 594 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Abhd15Q5F2F2 459 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tsr1Q5SWD9 803 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Pabpc4Q6PHQ9 660 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Angel2Q8K1C0 544 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Krtap5-3Q9D226 196 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Celf2Q9Z0H4 508 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 AtrnQ9WU60 1428 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Rgs12Q8CGE9 1381 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Sema3fO88632 785 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 CopeO89079 308 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Atf2P16951 487 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Grin1P35438 938 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Gja5Q01231 358 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 RnmtQ9D0L8 465 aaKnown RBP12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Cyp2s1Q9DBX6 501 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Tsc1Q9EP53 1161 aa12.82□□□□□ -0.36
Pcif1-201ENSMUST00000041643 Hebp1Q9R257 190 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms