RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Haus4Q8BFT2 363 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 LdhbP16125 334 aaKnown RBP14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cul4aQ3TCH7 759 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ece1Q4PZA2 769 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Letm2Q7TNU7 480 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pgm1Q9D0F9 562 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gid8Q9D7M1 228 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Sh2d4aQ9D7V1 421 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Fam81bA0A140LI28 432 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Plekhg4A0A1L1SU27 1217 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Copb2O55029 905 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 DtnbO70585 659 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Acap2Q6ZQK5 770 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Olfr118Q7TRJ6 321 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Nek9Q8K1R7 984 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Lire1P11260 357 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pou5f1P20263 352 aaKnown RBP14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Adora1Q60612 326 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Sh3gl1Q62419 368 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Fbxo11Q7TPD1 930 aaKnown RBP14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 EcsitQ9QZH6 435 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gfpt2Q9Z2Z9 682 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ano5Q75UR0 904 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Dnaaf2Q8BPI1 814 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pagr1aQ99L02 253 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kif19Q99PT9 997 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Shcbp1Q9Z179 668 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Setd1bQ8CFT2 1985 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Serpinb9O08797 374 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Mup5P11591 180 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tfdp1Q08639 410 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zbtb8osQ505B7 168 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Slc6a15Q8BG16 729 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Klhl12Q8BZM0 568 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Snx16Q8C080 344 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ccdc80Q8R2G6 949 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Stx18Q8VDS8 334 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Mylk3Q3UIZ8 795 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ppp2r2aQ6P1F6 447 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ddx55Q6ZPL9 600 aaKnown RBP14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kbtbd3Q8BHI4 607 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Olfml3Q8BK62 406 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Chchd6Q91VN4 273 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Apba1B2RUJ5 842 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pagr1bF6V0H0 108 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm8922F6XVS9 199 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gtf2a1lQ8R4I4 468 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rnf8Q8VC56 488 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cbx6Q9DBY5 414 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Aox2Q5SGK3 1345 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 FosP01101 380 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Iars2Q8BIJ6 1012 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pstpip2Q99M15 334 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Trpc4Q9QUQ5 974 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Arl4cP61208 192 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Serpina1eQ00898 413 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Ccdc151Q8BSN3 593 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tmem191cQ9JJB1 302 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gabpb1Q00420 383 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tnfaip2Q61333 691 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Bcap31Q61335 245 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Plcg2Q8CIH5 1265 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Agr3Q8R3W7 165 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rbm31yQ9D3U4 565 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tfap4Q9JIZ5 338 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pacsin1Q61644 441 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Runx1t1Q61909 577 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Bola3Q8CEI1 110 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Zkscan3Q91VW9 553 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Trip4Q9QXN3 581 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 TnnQ80Z71 1560 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Tex13cD3YU32 604 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Msr1P30204 458 aaKnown RBP14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 VcpQ01853 806 aaKnown RBP14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Lrrc8eQ66JT1 795 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cwf19l2Q8BG79 887 aaKnown RBP14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Q8BWG4 1187 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kcnv2Q8CFS6 562 aa14.88□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Trim47Q8C0E3 641 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Naa30Q8CES0 364 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Art3Q8R2G4 371 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm20911A0A087WSS0 222 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Kcng1A2BDX4 514 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm10250G3X9L6 160 aaKnown RBP14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Faf2Q3TDN2 445 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 EspnlQ3UYR4 1005 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 PhkbQ7TSH2 1085 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rbm43Q99J64 343 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Them5Q9CQJ0 248 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Khdc3Q9CWU5 440 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Atp5hQ9DCX2 161 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 NpatQ8BMA5 1420 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Adcy9P51830 1353 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Cyp11b2P15539 500 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rtl3Q6P1Y1 553 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Psmb9P28076 219 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Stn1Q8K2X3 378 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Rpa3Q9CQ71 121 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Gm3755K7N743 167 aa14.87□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Il2P04351 169 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms