RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gja10Q9WUS4 505 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Kiaa1468Q148V7 1216 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Prmt9Q3U3W5 846 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 CpQ61147 1061 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ankrd13aQ80UP5 588 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Lrrc1Q80VQ1 524 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Trim35Q8C006 501 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 NcaphQ8C156 731 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Slc18a1Q8R090 521 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Aipl1Q924K1 328 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tnpo2Q99LG2 887 aaKnown RBP17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Kank3Q9Z1P7 791 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Akap5D3YVF0 745 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tspyl1O88852 379 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Coq7P97478 217 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ripply1Q2WG77 201 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ddx31Q6NZQ2 687 aaKnown RBP17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Gimap4Q99JY3 219 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Glrx3Q9CQM9 337 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Snx24Q9CRB0 169 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Nr2e3Q9QXZ7 395 aa17.95■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ccdc144bE9PVZ3 520 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Znf513Q6PD29 541 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ephb1Q8CBF3 984 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 CrebzfQ91ZR3 358 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Bzw1Q9CQC6 419 aaKnown RBP17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 AacsQ9D2R0 672 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Rwdd2aQ9D9S3 292 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ndel1Q9ERR1 345 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Pdzd4Q9QY39 772 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tulp1Q9Z273 543 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Cdc42bpgQ80UW5 1551 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Cylc2B1AWN8 422 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 VdrP48281 422 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Mks1Q5SW45 561 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Telo2Q9DC40 840 aaKnown RBP17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Pex11aQ9Z211 246 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 YwhagP61982 247 aaKnown RBP17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ksr1Q61097 873 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Chn2Q80XD1 332 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Terb1Q8C0V1 768 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ushbp1Q8R370 680 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Prpf3Q922U1 683 aaKnown RBP17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Cdc42bpbQ7TT50 1713 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Gm17615E9Q9P2 165 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Svs3aF2Z472 265 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Uhmk1P97343 419 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Nlrp9bQ66X22 1003 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Catsper3Q80W99 395 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Atp6v1e2Q9D593 226 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Chmp2aQ9DB34 222 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Fmnl1Q9JL26 1094 aa17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tcof1O08784 1320 aaKnown RBP17.94■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Krt78E9Q0F0 1068 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Pms2P54279 859 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Kpnb1P70168 876 aaKnown RBP17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Nsun2Q1HFZ0 757 aaKnown RBP17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tmprss11aQ3UQ41 389 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Sh3gl2Q62420 352 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Phc1Q64028 1012 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Nuak1Q641K5 658 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 LzicQ8K3C3 190 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Kctd10Q922M3 315 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 MmadhcQ99LS1 296 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Fam81bA0A140LI28 432 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Pagr1bF6V0H0 108 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ctdnep1Q3TP92 244 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Stxbp3Q60770 592 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Pagr1aQ99L02 253 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Prex1Q69ZK0 1650 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Gm4297D3YWB7 211 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Rap1gds1E9Q912 607 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 CidebO70303 219 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Aggf1Q7TN31 711 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 GlyctkQ8QZY2 523 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Scrn1Q9CZC8 414 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Arl10Q9QXJ4 243 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 AW822073A0A0N4SUK1 652 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Cfap221A9Q751 836 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 ErmardE9Q048 622 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Zfy1P10925 782 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Gad1P48318 593 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Dhx37Q6NZL1 1150 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Fhod1Q6P9Q4 1197 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Afap1l1Q8BZI0 768 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Dclre1bQ8C7W7 541 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Fam53cQ8BXQ8 393 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Prpf31Q8CCF0 499 aaKnown RBP17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Lrrc41Q8K1C9 807 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Trpm8Q8R4D5 1104 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Creb3l3Q91XE9 479 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Ecel1Q9JMI0 775 aa17.93■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Fndc1E9Q043 1732 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Rabgap1lA6H6A9 815 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Mybl1P51960 751 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Wfs1P56695 890 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Arhgap17Q3UIA2 846 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Gm5592Q3V0A6 857 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 LrmpQ60664 539 aa17.92■□□□□ 0.46
Col17a1-201ENSMUST00000026045 Tmco4Q91WU4 631 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms