RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W YMR230W-AQ3E7B5 62 aa4.44□□□□□ -1.7
YDC1YPL087W RPL20AP0CX23 172 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W RPL20BP0CX24 172 aaPredicted RBP4.43□□□□□ -1.7
YDC1YPL087W SAM1P10659 382 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W ATR1P13090 542 aa4.43□□□□□ -1.7
YDC1YPL087W FRE1P32791 686 aa4.43□□□□□ -1.7
YDC1YPL087W RAD5P32849 1169 aaPredicted RBP4.43□□□□□ -1.7
YDC1YPL087W BUD2P33314 1104 aa4.43□□□□□ -1.7
YDC1YPL087W CSG2P35206 410 aa4.43□□□□□ -1.7
YDC1YPL087W POP4P38336 279 aa4.43□□□□□ -1.7
YDC1YPL087W OTU2P38747 307 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W RIO2P40160 425 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W YJL213WP40896 331 aa4.43□□□□□ -1.7
YDC1YPL087W AIM22P47051 409 aa4.43□□□□□ -1.7
YDC1YPL087W ILM1P47155 203 aa4.43□□□□□ -1.7
YDC1YPL087W HSH155P49955 971 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W DRN1P53255 507 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W ARK1P53974 638 aa4.43□□□□□ -1.7
YDC1YPL087W SPC24Q04477 213 aa4.43□□□□□ -1.7
YDC1YPL087W RBS1Q05672 457 aaKnown RBP4.43□□□□□ -1.7
YDC1YPL087W SFH1Q06168 426 aa4.43□□□□□ -1.7
YDC1YPL087W ECM7Q06200 448 aa4.43□□□□□ -1.7
YDC1YPL087W PHO92Q06390 306 aa4.43□□□□□ -1.7
YDC1YPL087W ARG3P05150 338 aa4.42□□□□□ -1.7
YDC1YPL087W RPL31BP0C2H9 113 aaKnown RBP4.42□□□□□ -1.7
YDC1YPL087W CUP1-1P0CX80 61 aa4.42□□□□□ -1.7
YDC1YPL087W CUP1-2P0CX81 61 aa4.42□□□□□ -1.7
YDC1YPL087W PRP16P15938 1071 aaPredicted RBP4.42□□□□□ -1.7
YDC1YPL087W SWE1P32944 819 aa4.42□□□□□ -1.7
YDC1YPL087W MSN2P33748 704 aa4.42□□□□□ -1.7
YDC1YPL087W RSM22P36056 628 aa4.42□□□□□ -1.7
YDC1YPL087W TEL1P38110 2787 aa4.42□□□□□ -1.7
YDC1YPL087W MMS4P38257 691 aa4.42□□□□□ -1.7
YDC1YPL087W VHC1P38329 1120 aa4.42□□□□□ -1.7
YDC1YPL087W PCA1P38360 1216 aa4.42□□□□□ -1.7
YDC1YPL087W NDT80P38830 627 aa4.42□□□□□ -1.7
YDC1YPL087W SHO1P40073 367 aa4.42□□□□□ -1.7
YDC1YPL087W SMX2P40204 77 aaKnown RBP4.42□□□□□ -1.7
YDC1YPL087W YMR134WP40207 237 aa4.42□□□□□ -1.7
YDC1YPL087W ALG8P40351 577 aa4.42□□□□□ -1.7
YDC1YPL087W YNL320WP42840 284 aa4.42□□□□□ -1.7
YDC1YPL087W PHO86P46956 311 aa4.42□□□□□ -1.7
YDC1YPL087W YDL186WP48568 277 aa4.42□□□□□ -1.7
YDC1YPL087W BRO1P48582 844 aa4.42□□□□□ -1.7
YDC1YPL087W YML6P51998 286 aa4.42□□□□□ -1.7
YDC1YPL087W YMR027WQ04371 470 aa4.42□□□□□ -1.7
YDC1YPL087W FAR8Q05040 523 aa4.42□□□□□ -1.7
YDC1YPL087W IES4Q08561 116 aa4.42□□□□□ -1.7
YDC1YPL087W AI5_BETAQ9ZZX0 354 aa4.42□□□□□ -1.7
YDC1YPL087W ARG4P04076 463 aaPredicted RBP4.41□□□□□ -1.7
YDC1YPL087W SRV2P17555 526 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W GLK1P17709 500 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W SGV1P23293 657 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W CPR3P25719 182 aa4.41□□□□□ -1.7
YDC1YPL087W REC114P32841 428 aa4.41□□□□□ -1.7
YDC1YPL087W MRX3P38172 270 aa4.41□□□□□ -1.7
YDC1YPL087W HEK2P38199 381 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
YDC1YPL087W MSG5P38590 489 aa4.41□□□□□ -1.7
YDC1YPL087W YEL057CP39983 233 aa4.41□□□□□ -1.7
YDC1YPL087W POP1P41812 875 aa4.41□□□□□ -1.7
YDC1YPL087W IRC6P43615 237 aa4.41□□□□□ -1.7
YDC1YPL087W CPR7P47103 393 aa4.41□□□□□ -1.7
YDC1YPL087W KTR5P53966 522 aaPredicted RBP4.41□□□□□ -1.7
YDC1YPL087W TIM10P87108 93 aa4.41□□□□□ -1.7
YDC1YPL087W RLI1Q03195 608 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W PRM6Q04705 352 aa4.41□□□□□ -1.7
YDC1YPL087W CMS1Q07897 291 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W YPL225WQ08971 146 aaKnown RBP4.41□□□□□ -1.7
YDC1YPL087W RIF1P29539 1916 aa4.4□□□□□ -1.7
YDC1YPL087W RHO2P06781 192 aa4.4□□□□□ -1.71
YDC1YPL087W GDH1P07262 454 aaKnown RBP4.4□□□□□ -1.71
YDC1YPL087W PMR1P13586 950 aa4.4□□□□□ -1.71
YDC1YPL087W DAL2P25335 343 aa4.4□□□□□ -1.71
YDC1YPL087W ELO2P25358 347 aa4.4□□□□□ -1.71
YDC1YPL087W CRM1P30822 1084 aaKnown RBP4.4□□□□□ -1.71
YDC1YPL087W GYP6P32806 458 aa4.4□□□□□ -1.71
YDC1YPL087W SEC66P33754 206 aa4.4□□□□□ -1.71
YDC1YPL087W KDX1P36005 433 aa4.4□□□□□ -1.71
YDC1YPL087W TUL1P36096 758 aa4.4□□□□□ -1.71
YDC1YPL087W FZO1P38297 855 aa4.4□□□□□ -1.71
YDC1YPL087W MTC4P38335 694 aaKnown RBP4.4□□□□□ -1.71
YDC1YPL087W HXT14P42833 540 aa4.4□□□□□ -1.71
YDC1YPL087W OCA1P50946 238 aaPredicted RBP4.4□□□□□ -1.71
YDC1YPL087W COS10P52924 374 aa4.4□□□□□ -1.71
YDC1YPL087W TAF6P53040 516 aa4.4□□□□□ -1.71
YDC1YPL087W IMP4P53941 290 aaKnown RBP4.4□□□□□ -1.71
YDC1YPL087W PPM1Q04081 328 aa4.4□□□□□ -1.71
YDC1YPL087W YDR222WQ04925 415 aa4.4□□□□□ -1.71
YDC1YPL087W APC5Q08683 685 aa4.4□□□□□ -1.71
YDC1YPL087W ERP3Q12403 225 aa4.4□□□□□ -1.71
YDC1YPL087W INH1P01097 85 aa4.39□□□□□ -1.71
YDC1YPL087W LEU4P06208 619 aaKnown RBP4.39□□□□□ -1.71
YDC1YPL087W CKA1P15790 372 aa4.39□□□□□ -1.71
YDC1YPL087W CDC42P19073 191 aa4.39□□□□□ -1.71
YDC1YPL087W TOA1P32773 286 aa4.39□□□□□ -1.71
YDC1YPL087W PMU1P36069 295 aa4.39□□□□□ -1.71
YDC1YPL087W MED8P38304 223 aa4.39□□□□□ -1.71
YDC1YPL087W MET18P40469 1032 aa4.39□□□□□ -1.71
YDC1YPL087W RPR2P40571 144 aa4.39□□□□□ -1.71
YDC1YPL087W SNZ3P43545 298 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms