RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W HSV2P50079 448 aaPredicted RBP9.77□□□□□ -0.85
PRE6YOL038W UBC9P50623 157 aaPredicted RBP9.77□□□□□ -0.85
PRE6YOL038W ATP25Q03153 612 aa9.77□□□□□ -0.85
PRE6YOL038W GIS1Q03833 894 aa9.77□□□□□ -0.85
PRE6YOL038W SHE9Q04172 456 aa9.77□□□□□ -0.85
PRE6YOL038W YLR036CQ07986 203 aa9.77□□□□□ -0.85
PRE6YOL038W FDH1Q08911 376 aa9.77□□□□□ -0.85
PRE6YOL038W YOR032W-AQ8TGS1 66 aa9.77□□□□□ -0.85
PRE6YOL038W YPT6Q99260 215 aa9.77□□□□□ -0.85
PRE6YOL038W PHO91P27514 894 aa9.76□□□□□ -0.85
PRE6YOL038W ANS1P38832 159 aa9.76□□□□□ -0.85
PRE6YOL038W YEL020CP39994 560 aa9.76□□□□□ -0.85
PRE6YOL038W IRC6P43615 237 aa9.76□□□□□ -0.85
PRE6YOL038W MTR3P48240 250 aaPredicted RBP9.76□□□□□ -0.85
PRE6YOL038W BSC5P53755 489 aa9.76□□□□□ -0.85
PRE6YOL038W INP1Q03694 420 aa9.76□□□□□ -0.85
PRE6YOL038W YLR352WQ06479 807 aa9.76□□□□□ -0.85
PRE6YOL038W TAD3Q9URQ3 322 aa9.76□□□□□ -0.85
PRE6YOL038W YCL049CP25577 312 aa9.75□□□□□ -0.85
PRE6YOL038W MRPL17P36528 281 aa9.75□□□□□ -0.85
PRE6YOL038W APS3P47064 194 aa9.75□□□□□ -0.85
PRE6YOL038W RPN14P53196 417 aa9.75□□□□□ -0.85
PRE6YOL038W YLR460CP54007 376 aa9.75□□□□□ -0.85
PRE6YOL038W WTM2Q12206 467 aa9.75□□□□□ -0.85
PRE6YOL038W PSF1Q12488 208 aa9.75□□□□□ -0.85
PRE6YOL038W RAD14P28519 371 aa9.74□□□□□ -0.85
PRE6YOL038W KRE6P32486 720 aa9.74□□□□□ -0.85
PRE6YOL038W MKK1P32490 508 aa9.74□□□□□ -0.85
PRE6YOL038W GDT1P38301 280 aaPredicted RBP9.74□□□□□ -0.85
PRE6YOL038W YNL208WP40159 199 aaKnown RBP9.74□□□□□ -0.85
PRE6YOL038W RPM2Q02773 1202 aa9.74□□□□□ -0.85
PRE6YOL038W PAL1Q05518 499 aaKnown RBP9.74□□□□□ -0.85
PRE6YOL038W BAG7Q12128 409 aa9.74□□□□□ -0.85
PRE6YOL038W ADE5,7P07244 802 aaKnown RBP9.73□□□□□ -0.85
PRE6YOL038W PBS2P08018 668 aa9.73□□□□□ -0.85
PRE6YOL038W ARF1P11076 181 aaKnown RBP9.73□□□□□ -0.85
PRE6YOL038W CCA1P21269 546 aa9.73□□□□□ -0.85
PRE6YOL038W RVS161P25343 265 aaKnown RBP9.73□□□□□ -0.85
PRE6YOL038W NGG1P32494 702 aa9.73□□□□□ -0.85
PRE6YOL038W TUL1P36096 758 aa9.73□□□□□ -0.85
PRE6YOL038W APE4P38821 490 aa9.73□□□□□ -0.85
PRE6YOL038W JEM1P40358 645 aa9.73□□□□□ -0.85
PRE6YOL038W BPL1P48445 690 aaPredicted RBP9.73□□□□□ -0.85
PRE6YOL038W YML119WQ03208 357 aa9.73□□□□□ -0.85
PRE6YOL038W RIB2Q12362 591 aaKnown RBP9.73□□□□□ -0.85
PRE6YOL038W RPB10P22139 70 aa9.72□□□□□ -0.85
PRE6YOL038W ERG8P24521 451 aa9.72□□□□□ -0.85
PRE6YOL038W LHS1P36016 881 aa9.72□□□□□ -0.85
PRE6YOL038W HRB1P38922 454 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
PRE6YOL038W AST2P39945 430 aaKnown RBP9.72□□□□□ -0.85
PRE6YOL038W RGI1P40043 161 aaPredicted RBP9.72□□□□□ -0.85
PRE6YOL038W SHR5P41912 237 aa9.72□□□□□ -0.85
PRE6YOL038W PGU1P47180 361 aa9.72□□□□□ -0.85
PRE6YOL038W PAC10P48363 199 aa9.72□□□□□ -0.85
PRE6YOL038W PFA5Q03289 374 aa9.72□□□□□ -0.85
PRE6YOL038W FMN1Q03778 218 aa9.72□□□□□ -0.85
PRE6YOL038W RRG7Q08774 242 aaPredicted RBP9.72□□□□□ -0.85
PRE6YOL038W EXO70P19658 623 aa9.71□□□□□ -0.86
PRE6YOL038W ATS1P31386 333 aa9.71□□□□□ -0.86
PRE6YOL038W NUP2P32499 720 aa9.71□□□□□ -0.86
PRE6YOL038W SNU114P36048 1008 aaKnown RBP9.71□□□□□ -0.86
PRE6YOL038W RPS12P48589 143 aaKnown RBP9.71□□□□□ -0.86
PRE6YOL038W YGR079WP53249 370 aa9.71□□□□□ -0.86
PRE6YOL038W RNH70P53331 553 aa9.71□□□□□ -0.86
PRE6YOL038W LGE1Q02796 332 aaKnown RBP9.71□□□□□ -0.86
PRE6YOL038W NCE101Q02820 53 aa9.71□□□□□ -0.86
PRE6YOL038W MIX14Q04341 121 aa9.71□□□□□ -0.86
PRE6YOL038W RPN6Q12377 434 aa9.71□□□□□ -0.86
PRE6YOL038W FLO9P39712 1322 aa9.71□□□□□ -0.86
PRE6YOL038W BLM10P43583 2143 aa9.71□□□□□ -0.86
PRE6YOL038W CTA1P15202 515 aa9.7□□□□□ -0.86
PRE6YOL038W MEF1P25039 761 aa9.7□□□□□ -0.86
PRE6YOL038W ERP5P38819 212 aa9.7□□□□□ -0.86
PRE6YOL038W MRPS18P42847 217 aa9.7□□□□□ -0.86
PRE6YOL038W DIA2Q08496 732 aaPredicted RBP9.7□□□□□ -0.86
PRE6YOL038W YOS9Q99220 542 aa9.7□□□□□ -0.86
PRE6YOL038W RPP2BP02400 110 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W FLP1P03870 423 aa9.69□□□□□ -0.86
PRE6YOL038W ARG3P05150 338 aa9.69□□□□□ -0.86
PRE6YOL038W HTS1P07263 546 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W KGD1P20967 1014 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W ATG15P25641 520 aa9.69□□□□□ -0.86
PRE6YOL038W PTC6P25646 442 aa9.69□□□□□ -0.86
PRE6YOL038W TOA1P32773 286 aa9.69□□□□□ -0.86
PRE6YOL038W YIL067CP40514 678 aa9.69□□□□□ -0.86
PRE6YOL038W YFR054CP43622 192 aa9.69□□□□□ -0.86
PRE6YOL038W PRY1P47032 299 aa9.69□□□□□ -0.86
PRE6YOL038W PDR16P53860 351 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W YSA1Q01976 231 aa9.69□□□□□ -0.86
PRE6YOL038W SWP1Q02795 286 aa9.69□□□□□ -0.86
PRE6YOL038W CTL1Q03220 320 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W PLM2Q04383 521 aa9.69□□□□□ -0.86
PRE6YOL038W YLR446WQ06204 433 aa9.69□□□□□ -0.86
PRE6YOL038W RPS21BQ3E754 87 aaKnown RBP9.69□□□□□ -0.86
PRE6YOL038W ERD1P16151 362 aa9.68□□□□□ -0.86
PRE6YOL038W NCP1P16603 691 aaKnown RBP9.68□□□□□ -0.86
PRE6YOL038W YAP1P19880 650 aaKnown RBP9.68□□□□□ -0.86
PRE6YOL038W LHP1P33399 275 aaKnown RBP9.68□□□□□ -0.86
PRE6YOL038W ROT2P38138 954 aa9.68□□□□□ -0.86
PRE6YOL038W HEK2P38199 381 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms