RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH1	YKL148C	AZF1	P41696	914 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	PAC10	P48363	199 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	MKC7	P53379	596 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	ZRG17	P53735	605 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	YMR087W	Q04299	284 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	OPT2	Q06593	877 aa		11.46	□□□□□ -0.58
SDH1	YKL148C	PDE2	P06776	526 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	RPS21A	P0C0V8	87 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	GRX2	P17695	143 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	PHO84	P25297	587 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	CTS1	P29029	562 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	GUT1	P32190	709 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	ATG14	P38270	344 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	YDR061W	Q12298	539 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	SUS1	Q6WNK7	96 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	REV1	P12689	985 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	SAR1	P20606	190 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	STE5	P32917	917 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	MBA1	P38300	278 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	NVJ1	P38881	321 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	PYK2	P52489	506 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	KXD1	P53158	218 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	TPS1	Q00764	495 aa	Known RBP	11.45	□□□□□ -0.58
SDH1	YKL148C	DCI1	Q08558	271 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	YPR1	Q12458	312 aa		11.45	□□□□□ -0.58
SDH1	YKL148C	HTS1	P07263	546 aa	Known RBP	11.44	□□□□□ -0.58
SDH1	YKL148C	KAP122	P32767	1081 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	PPQ1	P32945	549 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	PET112	P33893	541 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	GIM4	P40005	111 aa	Known RBP	11.44	□□□□□ -0.58
SDH1	YKL148C	IRC7	P43623	340 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	COG7	P53195	279 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	MRPL50	P53724	139 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	YDR514C	Q04408	483 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	YPL066W	Q12194	479 aa		11.44	□□□□□ -0.58
SDH1	YKL148C	GGC1	P38988	300 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	RCY1	P39531	840 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	YTA6	P40328	754 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	YFR018C	P43599	363 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	LSG1	P53145	640 aa	Known RBP	11.43	□□□□□ -0.58
SDH1	YKL148C	YSA1	Q01976	231 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	HTZ1	Q12692	134 aa	Known RBP	11.43	□□□□□ -0.58
SDH1	YKL148C	MKK1	P32490	508 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	SCO2	P38072	301 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	YHR035W	P38769	630 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	TAT2	P38967	592 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	ZRG8	P40021	1076 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	BPL1	P48445	690 aa	Predicted RBP	11.43	□□□□□ -0.58
SDH1	YKL148C	YGR079W	P53249	370 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	FDC1	Q03034	503 aa		11.43	□□□□□ -0.58
SDH1	YKL148C	YSR3	P23501	404 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	YJU3	P28321	313 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	PET127	P32606	800 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	BIG1	P38813	335 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	MBP1	P39678	833 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	FAU1	P40099	211 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	PAC11	P40960	533 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	ERG10	P41338	398 aa	Known RBP	11.42	□□□□□ -0.58
SDH1	YKL148C	IRC18	P47056	224 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	YAE1	P47118	141 aa	Predicted RBP	11.42	□□□□□ -0.58
SDH1	YKL148C	RSM7	P47150	247 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	NOG1	Q02892	647 aa	Known RBP	11.42	□□□□□ -0.58
SDH1	YKL148C	RQC1	Q05468	723 aa	Known RBP	11.42	□□□□□ -0.58
SDH1	YKL148C	RNH202	Q05635	350 aa		11.42	□□□□□ -0.58
SDH1	YKL148C	NBA1	Q08229	501 aa	Known RBP	11.42	□□□□□ -0.58
SDH1	YKL148C	STT4	P37297	1900 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	RSM22	P36056	628 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	YRO2	P38079	344 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	AIM10	P39965	576 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	COS12	P53053	380 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	YNR065C	P53751	1116 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	DUS1	P53759	423 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	RGC1	Q06108	1083 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	YOR238W	Q08634	303 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	RRG7	Q08774	242 aa	Predicted RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	YPL199C	Q08954	240 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	SLH1	P53327	1967 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	YCR016W	P25617	290 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	MGM101	P32787	269 aa	Known RBP	11.41	□□□□□ -0.58
SDH1	YKL148C	TOD6	P34219	525 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	APQ12	P40532	138 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	YFR020W	P43600	232 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	SDT1	P53078	280 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	BUD17	P53727	317 aa		11.41	□□□□□ -0.58
SDH1	YKL148C	RPS17A	P02407	136 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	ZWF1	P11412	505 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	KIN2	P13186	1147 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	RPS17B	P14127	136 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	KIN3	P22209	435 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	YPT7	P32939	208 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	PIM1	P36775	1133 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	LYS12	P40495	371 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	GDS1	P41913	522 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	PSA1	P41940	361 aa	Known RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	FLC3	P53121	802 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	CSL4	P53859	292 aa	Predicted RBP	11.4	□□□□□ -0.58
SDH1	YKL148C	HEH2	Q03281	663 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	VID22	Q05934	901 aa		11.4	□□□□□ -0.58
SDH1	YKL148C	CHL1	P22516	861 aa	Predicted RBP	11.39	□□□□□ -0.59
SDH1	YKL148C	KKQ8	P36004	724 aa		11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms