RNA–Protein interactions for RNA: YDL240W

LRG1, Transcript of GTPase-activating protein (GAP), yeast

Gene LRG1, Length 3,054 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRG1	YDL240W	TAF6	P53040	516 aa		3.21	□□□□□ -1.9
LRG1	YDL240W	SOK2	P53438	785 aa	Predicted RBP	3.21	□□□□□ -1.9
LRG1	YDL240W	PLB2	Q03674	706 aa		3.21	□□□□□ -1.9
LRG1	YDL240W	CHS5	Q12114	671 aa	Known RBP	3.21	□□□□□ -1.9
LRG1	YDL240W	BLM10	P43583	2143 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	DMC1	P25453	334 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	AAD3	P25612	363 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	MRPS5	P33759	307 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	PTH2	P34222	208 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	YOR062C	P36025	268 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	GPP1	P41277	250 aa	Known RBP	3.2	□□□□□ -1.9
LRG1	YDL240W	MSY1	P48527	492 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	GTR2	P53290	341 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	EAF7	P53911	425 aa	Known RBP	3.2	□□□□□ -1.9
LRG1	YDL240W	SHR3	Q02774	210 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	RRG7	Q08774	242 aa	Predicted RBP	3.2	□□□□□ -1.9
LRG1	YDL240W	ACM1	Q08981	209 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	DET1	Q99288	334 aa	Known RBP	3.2	□□□□□ -1.9
LRG1	YDL240W	CCW14	O13547	238 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	NUP1	P20676	1076 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	HIR2	P32480	875 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	SET3	P36124	751 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	MRPL39	P36533	70 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	ETR1	P38071	380 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	TSL1	P38427	1098 aa	Known RBP	3.2	□□□□□ -1.9
LRG1	YDL240W	FAA2	P39518	744 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	GAT2	P40209	560 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	RIC1	P40395	1056 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	AIM22	P47051	409 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	RCF2	P53721	224 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	MRL1	Q06815	381 aa		3.2	□□□□□ -1.9
LRG1	YDL240W	HEM15	P16622	393 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	EXO84	P38261	753 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YIL169C	P40442	995 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	COA1	P40452	197 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	AIR1	P40507	360 aa	Known RBP	3.19	□□□□□ -1.9
LRG1	YDL240W	NMD5	P46970	1048 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	MAD3	P47074	515 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	RHO5	P53879	331 aa	Known RBP	3.19	□□□□□ -1.9
LRG1	YDL240W	SLM2	P53955	656 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	RHO4	Q00246	291 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YPL107W	Q02873	248 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YPL039W	Q03080	316 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	GIS1	Q03833	894 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	MRPL1	Q04599	285 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	SEI1	Q06058	285 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	RAF1	Q06891	181 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YET3	Q07451	203 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	VHS3	Q08438	674 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	ATG34	Q12292	412 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	DBP10	Q12389	995 aa	Known RBP	3.19	□□□□□ -1.9
LRG1	YDL240W	UTR1	P21373	530 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	NFS1	P25374	497 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	RAD51	P25454	400 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	TDP1	P38319	544 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YER010C	P40011	234 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	ALG5	P40350	334 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	MRPS18	P42847	217 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	YJR039W	P47107	1121 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	TEX1	P53851	422 aa	Known RBP	3.19	□□□□□ -1.9
LRG1	YDL240W	IDP3	P53982	420 aa	Known RBP	3.19	□□□□□ -1.9
LRG1	YDL240W	YPL247C	Q12523	523 aa		3.19	□□□□□ -1.9
LRG1	YDL240W	CDC4	P07834	779 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	PUP2	P32379	260 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	YEL043W	P32618	956 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	PTR2	P32901	601 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	VRP1	P37370	817 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	PTH1	P38876	190 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	SEC31	P38968	1273 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
LRG1	YDL240W	AST2	P39945	430 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	YJL068C	P40363	299 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	ABM1	P47146	123 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	UPF3	P48412	387 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	LSG1	P53145	640 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	NCE101	Q02820	53 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	MET31	Q03081	177 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	YMR155W	Q03795	547 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	URC2	Q04411	772 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	PAL1	Q05518	499 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	FMP40	Q08968	688 aa	Predicted RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	RPN5	Q12250	445 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	COS2	P0CX12	379 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	COS3	P0CX13	379 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	CTR86	P25355	563 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	SYP1	P25623	870 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	DBF20	P32328	564 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	YME1	P32795	747 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	ARN2	P38724	620 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	SOL3	P38858	249 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	YJL206C	P39529	758 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	AYR1	P40471	297 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	QRI1	P43123	477 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	COS4	P43542	379 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	PRY1	P47032	299 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	SWP1	Q02795	286 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	MCM16	Q12262	181 aa		3.18	□□□□□ -1.9
LRG1	YDL240W	FOL3	Q12676	427 aa	Predicted RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	KGD1	P20967	1014 aa	Known RBP	3.18	□□□□□ -1.9
LRG1	YDL240W	RPB9	P27999	122 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms