RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TLK2Q86UE8 772 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 NEK9Q8TD19 979 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 SEPT1Q8WYJ6 367 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 GPR20Q99678 358 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 HSD17B14Q9BPX1 270 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 LXNQ9BS40 222 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 NT5C3AQ9H0P0 336 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 DDX19AQ9NUU7 478 aaKnown RBP19.58■□□□□ 0.72
PHGDH-230ENST00000641927 GABBR1Q9UBS5 961 aa19.58■□□□□ 0.72
PHGDH-230ENST00000641927 SEPT4O43236 478 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 P4HBP07237 508 aaKnown RBP19.57■□□□□ 0.72
PHGDH-230ENST00000641927 TCF7P36402 384 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-230ENST00000641927 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 ABHD15Q6UXT9 468 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 TRMT1LQ7Z2T5 733 aaKnown RBP19.57■□□□□ 0.72
PHGDH-230ENST00000641927 CEP57L1Q8IYX8 460 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 CNNM3Q8NE01 707 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 SH3TC2Q8TF17 1288 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 AFG1LQ8WV93 481 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 PNMA5Q96PV4 448 aa19.57■□□□□ 0.72
PHGDH-230ENST00000641927 GNEQ9Y223 722 aaKnown RBP19.57■□□□□ 0.72
PHGDH-230ENST00000641927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 GSTTP1A0A1W2PQM5 241 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 SLC26A4O43511 780 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 QARSP47897 775 aaKnown RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 UTP14CQ5TAP6 766 aaKnown RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 CCDC60Q8IWA6 550 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 PPTC7Q8NI37 304 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 EMID1Q96A84 441 aaPredicted RBP19.56■□□□□ 0.72
PHGDH-230ENST00000641927 AP5M1Q9H0R1 490 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 A0A087WWV3 80 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 ATG7O95352 703 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 PSMC5P62195 406 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 UGCGQ16739 394 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 ATP6V0A1Q93050 837 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 AZI2Q9H6S1 392 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 ZSWIM4Q9H7M6 989 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 ZNF302Q9NR11 478 aa19.56■□□□□ 0.72
PHGDH-230ENST00000641927 RARBP10826 455 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 E2F4Q16254 413 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 CAMK4Q16566 473 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 SLC9C1Q4G0N8 1177 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 TMEM119Q4V9L6 283 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 HYIQ5T013 277 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 MAP3K21Q5TCX8 1036 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 KRBA2Q6ZNG9 492 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 CTU1Q7Z7A3 348 aaKnown RBP19.55■□□□□ 0.72
PHGDH-230ENST00000641927 CKAP2LQ8IYA6 745 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 GLG1Q92896 1179 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 WRAP73Q9P2S5 460 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-230ENST00000641927 DNM3Q9UQ16 869 aa19.55■□□□□ 0.72
PHGDH-230ENST00000641927 E9PMD0 336 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 DUSP11O75319 330 aaKnown RBP19.54■□□□□ 0.72
PHGDH-230ENST00000641927 DHX8Q14562 1220 aaKnown RBP19.54■□□□□ 0.72
PHGDH-230ENST00000641927 FAM160B1Q5W0V3 765 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 PDXDC2PQ6P474 469 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 KCNK18Q7Z418 384 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 PIGOQ8TEQ8 1089 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 SYAP1Q96A49 352 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-230ENST00000641927 CCDC34Q96HJ3 373 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 HMX1Q9NP08 348 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-230ENST00000641927 STK17AQ9UEE5 414 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 USP25Q9UHP3 1055 aa19.54■□□□□ 0.72
PHGDH-230ENST00000641927 ACTN4O43707 911 aaKnown RBP19.53■□□□□ 0.72
PHGDH-230ENST00000641927 DKC1O60832 514 aaKnown RBP eCLIP19.53■□□□□ 0.721e-16■■■■■ 39.7
PHGDH-230ENST00000641927 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
PHGDH-230ENST00000641927 SLFN14P0C7P3 912 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 STAT5BP51692 787 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 PSMC6P62333 389 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 BRDTQ58F21 947 aaPredicted RBP19.53■□□□□ 0.72
PHGDH-230ENST00000641927 LRRC15Q8TF66 581 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 RAD54LQ92698 747 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 TIGD1Q96MW7 591 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 NACC1Q96RE7 527 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 NUP62CLQ9H1M0 184 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 Q9Y3F1 56 aa19.53■□□□□ 0.72
PHGDH-230ENST00000641927 PPFIA4O75335 1185 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 MMP3P08254 477 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 C6orf222P0C671 652 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 MUTP22033 750 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 AFMP43652 599 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 CPT1AP50416 773 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 DGKDQ16760 1214 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 TRIM50Q86XT4 487 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 LARP4BQ92615 738 aaKnown RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 STAMQ92783 540 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 CCDC43Q96MW1 224 aaKnown RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 CUEDC2Q9H467 287 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 SPC25Q9HBM1 224 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 DDX20Q9UHI6 824 aaKnown RBP19.52■□□□□ 0.72
PHGDH-230ENST00000641927 IGSF9BQ9UPX0 1349 aa19.52■□□□□ 0.72
PHGDH-230ENST00000641927 IGKV6D-21A0A0A0MT36 114 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 ZBTB39O15060 712 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 MARK3P27448 753 aa19.52■□□□□ 0.71
PHGDH-230ENST00000641927 YWHABP31946 246 aaKnown RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms