RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 KNOP1Q1ED39 458 aaKnown RBP19.72■□□□□ 0.75
PHGDH-226ENST00000641756 RRAGAQ7L523 313 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 KIAA1328Q86T90 577 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 TRIM59Q8IWR1 403 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 ZC3H3Q8IXZ2 948 aaKnown RBP19.72■□□□□ 0.75
PHGDH-226ENST00000641756 NEK11Q8NG66 645 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHGDH-226ENST00000641756 ZNF541Q9H0D2 1346 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 FZD9O00144 591 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 CETN3O15182 167 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 CYP27A1Q02318 531 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 EDRF1Q3B7T1 1238 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 CCDC122Q5T0U0 273 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 PPP4R3CPQ6ZMV5 832 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 CCDC170Q8IYT3 715 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 CRACR2AQ9BSW2 395 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 WDR11Q9BZH6 1224 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 RPAP3Q9H6T3 665 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-226ENST00000641756 SLC38A10Q9HBR0 1119 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 PLAGL2Q9UPG8 496 aa19.72■□□□□ 0.75
PHGDH-226ENST00000641756 RPTORQ8N122 1335 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 RCCD1A6NED2 376 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 EIF3CLB5ME19 914 aaKnown RBP19.71■□□□□ 0.75
PHGDH-226ENST00000641756 MARSP56192 900 aaKnown RBP19.71■□□□□ 0.75
PHGDH-226ENST00000641756 KCNA1Q09470 495 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 SPP2Q13103 211 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 C1orf186Q6ZWK4 172 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 BANK1Q8NDB2 785 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 BAP1Q92560 729 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
PHGDH-226ENST00000641756 NAPGQ99747 312 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-226ENST00000641756 EPC1Q9H2F5 836 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 HAUS4Q9H6D7 363 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 ZSWIM4Q9H7M6 989 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 ARHGAP20Q9P2F6 1191 aa19.71■□□□□ 0.75
PHGDH-226ENST00000641756 FAM13AO94988 1023 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 CDK17Q00537 523 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 APBA1Q02410 837 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 EPHA7Q15375 998 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 CACNA2D4Q7Z3S7 1137 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 KRT26Q7Z3Y9 468 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 MCF2L2Q86YR7 1114 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 ZKSCAN4Q969J2 545 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 JAKMIP2Q96AA8 810 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 CCDC42Q96M95 316 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 LSM14BQ9BX40 385 aaKnown RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 NLRC4Q9NPP4 1024 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 KCNH7Q9NS40 1196 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 MYO1AQ9UBC5 1043 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 PPP1R9AQ9ULJ8 1098 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 SPDYE4A6NLX3 237 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 IPO7O95373 1038 aaKnown RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 TFRCP02786 760 aaKnown RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 HNRNPH3P31942 346 aaKnown RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 TEX35Q5T0J7 233 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 B3GNT9Q6UX72 402 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 KCTD17Q8N5Z5 321 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 MYCT1Q8N699 235 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 SYTL5Q8TDW5 730 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 LXNQ9BS40 222 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 LACRTQ9GZZ8 138 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 CDC23Q9UJX2 597 aa19.7■□□□□ 0.74
PHGDH-226ENST00000641756 CTDP1Q9Y5B0 961 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-226ENST00000641756 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 ZNF263O14978 683 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 NMT1P30419 496 aaKnown RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 ANGEL2Q5VTE6 544 aaKnown RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 PDXDC1Q6P996 788 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 WNK4Q96J92 1243 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 NACC1Q96RE7 527 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 TAAR1Q96RJ0 339 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 IKZF4Q9H2S9 585 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 CD2APQ9Y5K6 639 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 ASTN1O14525 1302 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 CALUO43852 315 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 NOL4O94818 638 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 EIF2AK2P19525 551 aaKnown RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 EIF4A3P38919 411 aaKnown RBP19.69■□□□□ 0.74
PHGDH-226ENST00000641756 GINM1Q9NU53 330 aa19.69■□□□□ 0.74
PHGDH-226ENST00000641756 PDXKO00764 312 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 CLIC2O15247 247 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 H2AFXP16104 143 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 GAP43P17677 238 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 RPS6P62753 249 aaKnown RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 MRPS9P82933 396 aaKnown RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 KCNH2Q12809 1159 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 BMT2Q1RMZ1 405 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 ZC2HC1CQ53FD0 456 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 MIER3Q7Z3K6 550 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 NLGN2Q8NFZ4 835 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 PURBQ96QR8 312 aaKnown RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 WRNIP1Q96S55 665 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 RIT2Q99578 217 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 SGIP1Q9BQI5 828 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 OLFML3Q9NRN5 406 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 TYW1Q9NV66 732 aaKnown RBP19.68■□□□□ 0.74
PHGDH-226ENST00000641756 FRMPD4Q14CM0 1322 aa19.68■□□□□ 0.74
PHGDH-226ENST00000641756 EPS15P42566 896 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms