RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	BHMT2	Q9H2M3	363 aa		18.52	■□□□□ 0.56
PHGDH-223	ENST00000641597	TDRD3	Q9H7E2	651 aa	Known RBP	18.52	■□□□□ 0.56
PHGDH-223	ENST00000641597		A0A1W2PRG0	241 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	TUBB	P07437	444 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	PTK2	Q05397	1052 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	MAPK8IP2	Q13387	824 aa	Predicted RBP	18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	CRYGN	Q8WXF5	182 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	LRRC27	Q9C0I9	530 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	GAN	Q9H2C0	597 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	MED4	Q9NPJ6	270 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	GREB1L	Q9C091	1923 aa	Predicted RBP	18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	KDM3A	Q9Y4C1	1321 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	CHMP2A	O43633	222 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	AKAP3	O75969	853 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	SERPING1	P05155	500 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	FAM153B	P0C7A2	387 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	KLHL30	Q0D2K2	578 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	FAM153C	Q494X1	144 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	MAP9	Q49MG5	647 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	LRRC31	Q6UY01	552 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	MSL3	Q8N5Y2	521 aa	Known RBP	18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	FAM153A	Q9UHL3	310 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	HDAC9	Q9UKV0	1011 aa		18.51	■□□□□ 0.55
PHGDH-223	ENST00000641597	MSH4	O15457	936 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	GH2	P01242	217 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	MMP10	P09238	476 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	EPS15	P42566	896 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	KIAA1755	Q5JYT7	1200 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	TCERG1L	Q5VWI1	586 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	GOLGA5	Q8TBA6	731 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	RBM46	Q8TBY0	533 aa	Known RBP	18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	BCS1L	Q9Y276	419 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	SSU72P8	A0A1W2PR75	194 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	ECE1	P42892	770 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	CTTN	Q14247	550 aa	Known RBP	18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	DPY19L2P1	Q6NXN4	242 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	ZDHHC15	Q96MV8	337 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	VIPAS39	Q9H9C1	493 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	FAM184B	Q9ULE4	1060 aa		18.5	■□□□□ 0.55
PHGDH-223	ENST00000641597	GOLGA6B	A6NDN3	693 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	TCP1	P17987	556 aa	Known RBP	18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	CARS	P49589	748 aa	Known RBP	18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	USP11	P51784	963 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	SLC18A3	Q16572	532 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	MUM1L1	Q5H9M0	696 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	CEP63	Q96MT8	703 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	NRXN2	Q9P2S2	1712 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	FRMD3	A2A2Y4	597 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	RBAK-RBAKDN	I3L0D1	243 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	AFAP1L1	Q8TED9	768 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	STIM2	Q9P246	746 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	PI4KB	Q9UBF8	816 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	SUGT1	Q9Y2Z0	365 aa		18.49	■□□□□ 0.55
PHGDH-223	ENST00000641597	GRID2IP	A4D2P6	1211 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	CETN3	O15182	167 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	NAB2	Q15742	525 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	C8orf74	Q6P047	294 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	LEKR1	Q6ZMV7	388 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	IFT81	Q8WYA0	676 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	IQCD	Q96DY2	449 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	AMN	Q9BXJ7	453 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	NFU1	Q9UMS0	254 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	PCDHB13	Q9Y5F0	798 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	ONECUT3	O60422	494 aa	Predicted RBP	18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	NPR1	P16066	1061 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	CYP3A7	P24462	503 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	COG2	Q14746	738 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	FBXO11	Q86XK2	927 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	ARL8A	Q96BM9	186 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	CCDC17	Q96LX7	622 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	ACBD3	Q9H3P7	528 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	MYO3B	Q8WXR4	1341 aa		18.48	■□□□□ 0.55
PHGDH-223	ENST00000641597	SPDYE3	A6NKU9	549 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	TULP2	O00295	520 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	UCHL3	P15374	230 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	PRLR	P16471	622 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	GUCY2F	P51841	1108 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ASIC2	Q16515	512 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	KNOP1	Q1ED39	458 aa	Known RBP	18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ABCB5	Q2M3G0	1257 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	IRF2BP2	Q7Z5L9	587 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	MKL1	Q969V6	931 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	MBOAT7	Q96N66	472 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	KRT12	Q99456	494 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	RSPH14	Q9UHP6	348 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	DNM3	Q9UQ16	869 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	QSER1	Q2KHR3	1735 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	GCNT3	O95395	438 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	MCM3	P25205	808 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	PON1	P27169	355 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	NMT1	P30419	496 aa	Known RBP	18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	PAFAH1B1	P43034	410 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	GUCY2D	Q02846	1103 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	DACT2	Q5SW24	774 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	IQCE	Q6IPM2	695 aa		18.47	■□□□□ 0.55
PHGDH-223	ENST00000641597	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.47	■□□□□ 0.55

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