RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
RBFOX1-224ENST00000641259 LACRTQ9GZZ8 138 aa12.96□□□□□ -0.33
RBFOX1-224ENST00000641259 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
RBFOX1-224ENST00000641259 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
RBFOX1-224ENST00000641259 FAM153AQ9UHL3 310 aa12.96□□□□□ -0.33
RBFOX1-224ENST00000641259 CALM1P0DP23 149 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 CALM2P0DP24 149 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 CALM3P0DP25 149 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 BMP6P22004 513 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 SCNN1BP51168 640 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 MFSD4BQ5TF39 518 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 BZW1Q7L1Q6 419 aaKnown RBP12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 TRIM74Q86UV6 250 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 TRIM73Q86UV7 250 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 CCDC25Q86WR0 208 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 LMNTD2Q8IXW0 634 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 CCDC197Q8NCU1 140 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.34
RBFOX1-224ENST00000641259 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 DDTLA6NHG4 134 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 ANKRD42Q8N9B4 389 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 WASF1Q92558 559 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 KCNK9Q9NPC2 374 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 HIP1RO75146 1068 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 SHMT1P34896 483 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 SPRED3Q2MJR0 410 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 SPATA4Q8NEY3 305 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 NEDD1Q8NHV4 660 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 GRM4Q14833 912 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 FBF1Q8TES7 1133 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 GRIN2DO15399 1336 aa12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
RBFOX1-224ENST00000641259 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 TRIM49BA6NDI0 452 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 RAD17O75943 681 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 FNTAP49354 379 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 AARSP49588 968 aaKnown RBP eCLIP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 COPB1P53618 953 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 NR1I3Q14994 352 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 QPCTQ16769 361 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 EAPPQ56P03 285 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 HHATQ5VTY9 493 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 USP17L2Q6R6M4 530 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 NELFBQ8WX92 580 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 FOXP1Q9H334 677 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 B4DLN1 442 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 CETN3O15182 167 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 PAPOLAP51003 745 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 EHHADHQ08426 723 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 CDK5RAP3Q96JB5 506 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 TSGA10Q9BZW7 698 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 SLC39A2Q9NP94 309 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 FAM107AO95990 144 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 NOVP48745 357 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 CEP131Q9UPN4 1083 aa12.94□□□□□ -0.34
RBFOX1-224ENST00000641259 PECAM1P16284 738 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 MAGEA1P43355 309 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 RPS6KA3P51812 740 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 RASSF7Q02833 373 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 LRRC14Q15048 493 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 TRADDQ15628 312 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 MUM1Q2TAK8 710 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 LRRC47Q8N1G4 583 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 CSRNP2Q9H175 543 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 CEP104O60308 925 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 MORC3Q14149 939 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 LLGL1Q15334 1064 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 PFKFB3Q16875 520 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 CCDC38Q502W7 563 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 AGAP11Q8TF27 550 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 IGKV6D-41A0A0C4DH26 115 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 PALM3A6NDB9 673 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 SCG2P13521 617 aa12.93□□□□□ -0.34
RBFOX1-224ENST00000641259 FKBP1AP62942 108 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms