RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 APOBEC3FQ8IUX4 373 aaKnown RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 PDCL2Q8N4E4 241 aa22.55■■□□□ 1.2
SP3-208ENST00000640958 ZNF397Q8NF99 534 aaPredicted RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 TRPM4Q8TD43 1214 aa22.55■■□□□ 1.2
SP3-208ENST00000640958 SYTL5Q8TDW5 730 aaPredicted RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 ZNHIT6Q9NWK9 470 aaKnown RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 WRAP73Q9P2S5 460 aaPredicted RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 MRFAP1Q9Y605 127 aa22.55■■□□□ 1.2
SP3-208ENST00000640958 C1orf186Q6ZWK4 172 aa22.55■■□□□ 1.2
SP3-208ENST00000640958 BCAS3Q9H6U6 928 aa22.55■■□□□ 1.2
SP3-208ENST00000640958 FAM207AQ9NSI2 230 aaPredicted RBP22.55■■□□□ 1.2
SP3-208ENST00000640958 GAP43P17677 238 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 HERVK_113P62684 666 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 KNOP1Q1ED39 458 aaKnown RBP22.54■■□□□ 1.2
SP3-208ENST00000640958 SAMD3Q8N6K7 520 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 OLFML3Q9NRN5 406 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 HOMER2Q9NSB8 354 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 MAP3K20Q9NYL2 800 aaKnown RBP22.54■■□□□ 1.2
SP3-208ENST00000640958 UBIAD1Q9Y5Z9 338 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 ZBTB39O15060 712 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 BACE1P56817 501 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 KCNMA1Q12791 1236 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 PCNX4Q63HM2 1172 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 WRNIP1Q96S55 665 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 MMRN2Q9H8L6 949 aa22.54■■□□□ 1.2
SP3-208ENST00000640958 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
SP3-208ENST00000640958 PTPRAP18433 802 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 CYLC1P35663 651 aaPredicted RBP22.53■■□□□ 1.2
SP3-208ENST00000640958 ADAM9Q13443 819 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 ZNF569Q5MCW4 686 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 CCDC170Q8IYT3 715 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 CCDC155Q8N6L0 562 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 SMCR8Q8TEV9 937 aaPredicted RBP22.53■■□□□ 1.2
SP3-208ENST00000640958 ZKSCAN4Q969J2 545 aaPredicted RBP22.53■■□□□ 1.2
SP3-208ENST00000640958 NACC1Q96RE7 527 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 CARD6Q9BX69 1037 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 KCNH7Q9NS40 1196 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 PLAGL2Q9UPG8 496 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 SSC5DA1L4H1 1573 aa22.53■■□□□ 1.2
SP3-208ENST00000640958 CETN3O15182 167 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 ZBED4O75132 1171 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 TADA3O75528 432 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 NR2F2P24468 414 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 MRPS9P82933 396 aaKnown RBP22.52■■□□□ 1.2
SP3-208ENST00000640958 TKFCQ3LXA3 575 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 PRAMEF18Q5VWM3 479 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 NEK9Q8TD19 979 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 BAP1Q92560 729 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 ATG4CQ96DT6 458 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 LXNQ9BS40 222 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 NHEJ1Q9H9Q4 299 aaPredicted RBP22.52■■□□□ 1.2
SP3-208ENST00000640958 AS3MTQ9HBK9 375 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 MYO1AQ9UBC5 1043 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 PNMA2Q9UL42 364 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 PDXKO00764 312 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 DHX15O43143 795 aaKnown RBP22.52■■□□□ 1.2
SP3-208ENST00000640958 FDX1P10109 184 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 RPS6P62753 249 aaKnown RBP22.52■■□□□ 1.2
SP3-208ENST00000640958 SLC35F6Q8N357 371 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 ZNF280CQ8ND82 737 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 WNK4Q96J92 1243 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 EDEM3Q9BZQ6 932 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 POLD4Q9HCU8 107 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 GPRC5DQ9NZD1 345 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 CGNQ9P2M7 1197 aaKnown RBP22.52■■□□□ 1.2
SP3-208ENST00000640958 ASTN1O14525 1302 aa22.52■■□□□ 1.2
SP3-208ENST00000640958 EIF3CLB5ME19 914 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 VWA5AO00534 786 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 FAM13AO94988 1023 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 ERCC6LQ2NKX8 1250 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 MNS1Q8NEH6 495 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 C12orf42Q96LP6 360 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 TAAR1Q96RJ0 339 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 EIF3CQ99613 913 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 AGO4Q9HCK5 861 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 JADE2Q9NQC1 790 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 PICK1Q9NRD5 415 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 TYW1Q9NV66 732 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 FAM184BQ9ULE4 1060 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 FZD1Q9UP38 647 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.51■■□□□ 1.19
SP3-208ENST00000640958 POLR2AP24928 1970 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 DDX39AO00148 427 aaKnown RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 ITGB3BPQ13352 177 aaPredicted RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 ZNF662Q6ZS27 426 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 NEK11Q8NG66 645 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 HAUS4Q9H6D7 363 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 CTDP1Q9Y5B0 961 aaPredicted RBP22.51■■□□□ 1.19
SP3-208ENST00000640958 SBF1O95248 1867 aa22.51■■□□□ 1.19
SP3-208ENST00000640958 CALUO43852 315 aaPredicted RBP22.5■■□□□ 1.19
SP3-208ENST00000640958 GCNT3O95395 438 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 ZNF131P52739 623 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 KRT83P78385 493 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 BANK1Q8NDB2 785 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 REPS2Q8NFH8 660 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 TRERF1Q96PN7 1200 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 GGA3Q9NZ52 723 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 KCND2Q9NZV8 630 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 PKD2L1Q9P0L9 805 aa22.5■■□□□ 1.19
SP3-208ENST00000640958 TRIM10Q9UDY6 481 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms