RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 TDO2P48775 406 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 ANGPT1Q15389 498 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 STXBP2Q15833 593 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 CCDC96Q2M329 555 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 HSP90AB4PQ58FF6 505 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
SCARB2-226ENST00000640916 ZKSCAN2Q63HK3 967 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 ZSCAN25Q6NSZ9 544 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 ANKRD54Q6NXT1 300 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 CCDC105Q8IYK2 499 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 APPBP2Q92624 585 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 PPP2R3CQ969Q6 453 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 BCAS3Q9H6U6 928 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
SCARB2-226ENST00000640916 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 USP24Q9UPU5 2620 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 SPTBN2O15020 2390 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 B4DLN1 442 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 FSCN2O14926 492 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 FOXP2O15409 715 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 ASGR2P07307 311 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
SCARB2-226ENST00000640916 ERVFC1P60507 584 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 PPARAQ07869 468 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 MGAT3Q09327 533 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 LPIN1Q14693 890 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 ZBTB33Q86T24 672 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
SCARB2-226ENST00000640916 DCLK2Q8N568 766 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 NSUN6Q8TEA1 469 aaKnown RBP9.52□□□□□ -0.89
SCARB2-226ENST00000640916 NEK1Q96PY6 1258 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 IWS1Q96ST2 819 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 APOL5Q9BWW9 433 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
SCARB2-226ENST00000640916 PCDHGA10Q9Y5H3 936 aa9.52□□□□□ -0.89
SCARB2-226ENST00000640916 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 H3BRB1 525 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 EIF3JO75822 258 aaKnown RBP9.51□□□□□ -0.89
SCARB2-226ENST00000640916 GHRP10912 638 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 PDHBP11177 359 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 GNAT2P19087 354 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 AOC1P19801 751 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 GATMP50440 423 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
SCARB2-226ENST00000640916 ITPRIPQ8IWB1 547 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 DTWD2Q8NBA8 298 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
SCARB2-226ENST00000640916 SPATA33Q96N06 139 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 RMDN3Q96TC7 470 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
SCARB2-226ENST00000640916 TMEM47Q9BQJ4 181 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 BCL11AQ9H165 835 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 SEMA4AQ9H3S1 761 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 POMKQ9H5K3 350 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 TUT1Q9H6E5 874 aaKnown RBP9.51□□□□□ -0.89
SCARB2-226ENST00000640916 SETD4Q9NVD3 440 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 TELO2Q9Y4R8 837 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 MRVI1Q9Y6F6 885 aa9.51□□□□□ -0.89
SCARB2-226ENST00000640916 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 RNF113AO15541 343 aaKnown RBP9.5□□□□□ -0.89
SCARB2-226ENST00000640916 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 APPP05067 770 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 LGALS2P05162 132 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 NR3C2P08235 984 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 SNHG28P0DPA3 235 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
SCARB2-226ENST00000640916 TECP42680 631 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 ZNF543Q08ER8 600 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 ST3GAL2Q16842 350 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 USH1GQ495M9 461 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 RASGRP4Q8TDF6 673 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 CDCA3Q99618 268 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-226ENST00000640916 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
SCARB2-226ENST00000640916 PXMP2Q9NR77 195 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 PNMA2Q9UL42 364 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 R4GN57 208 aa9.5□□□□□ -0.89
SCARB2-226ENST00000640916 OPLAHO14841 1288 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 GGPS1O95749 300 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 FGRP09769 529 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 UBA1P22314 1058 aaKnown RBP9.49□□□□□ -0.89
SCARB2-226ENST00000640916 COL9A2Q14055 689 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-226ENST00000640916 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
SCARB2-226ENST00000640916 FBXO47Q5MNV8 452 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 FLCNQ8NFG4 579 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 CYP2W1Q8TAV3 490 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 KCNG4Q8TDN1 519 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 LMBR1Q8WVP7 490 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 MAF1Q9H063 256 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 HCSTQ9UBK5 93 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 LIMD1Q9UGP4 676 aa9.49□□□□□ -0.89
SCARB2-226ENST00000640916 NR2E1Q9Y466 385 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms