RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 PCYT2Q99447 389 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 RNF26Q9BY78 433 aaPredicted RBP16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 SMARCAD1Q9H4L7 1026 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 CERS4Q9HA82 394 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 C6orf50Q9HD87 102 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 REV3LO60673 3130 aa16.42■□□□□ 0.22
HNRNPU-229ENST00000640440 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 MEIS1O00470 390 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 IFNAR1P17181 557 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 ACTR2P61160 394 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 DBF4BQ8NFT6 615 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 OSBPL7Q9BZF2 842 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 AZI2Q9H6S1 392 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 VPS54Q9P1Q0 977 aa16.41■□□□□ 0.22
HNRNPU-229ENST00000640440 TTC3P53804 2025 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 LCHNA4D1U4 455 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 EPOPA6NHQ4 379 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 FAM86B1E9PN63 330 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 FAM86B2P0C5J1 330 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 GNA11P29992 359 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 IGBP1P78318 339 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TAP1Q03518 808 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 FAM117BQ6P1L5 589 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 CCDC148Q8NFR7 591 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 CRYGNQ8WXF5 182 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 ARNTL2Q8WYA1 636 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 UIMC1Q96RL1 719 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
HNRNPU-229ENST00000640440 TCF20Q9UGU0 1960 aaKnown RBP16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 RFXAPO00287 272 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 GJB5O95377 273 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 CYP3A4P08684 503 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.213e-10■□□□□ 9.9
HNRNPU-229ENST00000640440 SPRED2Q7Z698 418 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 MICALL1Q8N3F8 863 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 SEPT8Q92599 483 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.21
HNRNPU-229ENST00000640440 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 MBLAC1A4D2B0 266 aaPredicted RBP16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 CPLX1O14810 134 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 CCNE2O96020 404 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 CHRNA1P02708 482 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 AMHP03971 560 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 INSRRP14616 1297 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 STAT5BP51692 787 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 STK3Q13188 491 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 PLCB4Q15147 1175 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 FAM26DQ5JW98 314 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 MARCH8Q5T0T0 291 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 MCTP2Q6DN12 878 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 DNAJB3Q8WWF6 145 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 ZBTB10Q96DT7 871 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 COL25A1Q9BXS0 654 aaPredicted RBP16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
HNRNPU-229ENST00000640440 IPO5O00410 1097 aaKnown RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 BACH1O14867 736 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 SETQ01105 290 aaPredicted RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 PRR16Q569H4 304 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 PLPPR4Q7Z2D5 763 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 RAD9AQ99638 391 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 ZNF577Q9BSK1 485 aa16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 SPTBN5Q9NRC6 3674 aaKnown RBP16.37■□□□□ 0.21
HNRNPU-229ENST00000640440 RALGAPA2Q2PPJ7 1873 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 RRN3P2A6NIE6 340 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 ATG7O95352 703 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 GHRP10912 638 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 NLRP5P59047 1200 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 MGAT3Q09327 533 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 CCDC60Q8IWA6 550 aaPredicted RBP16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 SH3GLB2Q9NR46 395 aa16.36■□□□□ 0.21
HNRNPU-229ENST00000640440 IGKV6D-21A0A0A0MT36 114 aa16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 POTEB3A0JP26 581 aa16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 GTPBP6O43824 516 aaPredicted RBP16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 FAM160B1Q5W0V3 765 aa16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 KRT40Q6A162 431 aa16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
HNRNPU-229ENST00000640440 POTEBQ6S5H4 581 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms