RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 UBR3Q6ZT12 1888 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 BAIAP3O94812 1187 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 INMTO95050 263 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 CFBP00751 764 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 RAG1P15918 1043 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 OAS2P29728 719 aaKnown RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 POLR2BP30876 1174 aaKnown RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 PHKA2P46019 1235 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 KIAA1614Q5VZ46 1190 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 OR2C3Q8N628 320 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 TMEM102Q8N9M5 508 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 UBXN10Q96LJ8 280 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 MAGEB10Q96LZ2 347 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 GPRC5BQ9NZH0 403 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 SAMD15Q9P1V8 674 aa8.56□□□□□ -1.04
NECAP1-220ENST00000639841 NAP1L2Q9ULW6 460 aaPredicted RBP8.56□□□□□ -1.04
NECAP1-220ENST00000639841 NCAPD2Q15021 1401 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 TOR1BO14657 336 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 SIAH2O43255 324 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 XPOTO43592 962 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 GTF2E1P29083 439 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 HOXC13P31276 330 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 LSSP48449 732 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 TGFB2P61812 414 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 LRRC32Q14392 662 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 FAAH2Q6GMR7 532 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 CCDC149Q6ZUS6 474 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 SNX32Q86XE0 403 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 PTRH1Q86Y79 214 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 PTPRN2Q92932 1015 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 TEKT5Q96M29 485 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 BHMT2Q9H2M3 363 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 LRCH1Q9Y2L9 728 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 TONSLQ96HA7 1378 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 RRN3P2A6NIE6 340 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 AREL1O15033 823 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 H2AFYO75367 372 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 OFD1O75665 1012 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 TBC1D8O95759 1140 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 ARNTP27540 789 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 PPM1AP35813 382 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 FXR1P51114 621 aaKnown RBP eCLIP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 SART3Q15020 963 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 CASC1Q6TDU7 716 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 Q6ZVU0 165 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 KCT2Q8NC54 265 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 RPGRQ92834 1020 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 PPP1R14AQ96A00 147 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 KIAA1191Q96A73 305 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 HVCN1Q96D96 273 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 DDX11Q96FC9 970 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 CDHR1Q96JP9 859 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 FAM193BQ96PV7 902 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-220ENST00000639841 CD248Q9HCU0 757 aa8.55□□□□□ -1.04
NECAP1-220ENST00000639841 ITGB4P16144 1822 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 ANKRD26Q9UPS8 1709 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 CRTAMO95727 393 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 IGHDP01880 384 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 HSP90AB1P08238 724 aaKnown RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 UBA7P41226 1012 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 ATAT1Q5SQI0 421 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 NDUFAF2Q8N183 169 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 PPP1R35Q8TAP8 253 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 ZSCAN18Q8TBC5 510 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 DIS3LQ8TF46 1054 aaKnown RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 ZNF496Q96IT1 587 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 VPS11Q9H270 941 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 ANKEF1Q9NU02 776 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 RTEL1Q9NZ71 1219 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 TRAF6Q9Y4K3 522 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 MAGED1Q9Y5V3 778 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-220ENST00000639841 RGPD2P0DJD1 1756 aa8.54□□□□□ -1.04
NECAP1-220ENST00000639841 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-220ENST00000639841 ULK1O75385 1050 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 TOMM70O94826 608 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 ABCB4P21439 1286 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 PRIM2P49643 509 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 PFKPQ01813 784 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 BTKQ06187 659 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 FAPQ12884 760 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 TDRD10Q5VZ19 366 aaKnown RBP8.53□□□□□ -1.04
NECAP1-220ENST00000639841 PDZD3Q86UT5 571 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 NUP133Q8WUM0 1156 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 BARD1Q99728 777 aaKnown RBP8.53□□□□□ -1.04
NECAP1-220ENST00000639841 HAUS7Q99871 368 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 FAM204AQ9H8W3 233 aa8.53□□□□□ -1.04
NECAP1-220ENST00000639841 THG1LQ9NWX6 298 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms